Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr185g00002 ATGGCAAGCAGTAGATCTCCTGTGGCATATGCTAATGCTGTGGTTGTGGACAAAAATAAAAAGCATGATCATGACTTGAATAGGGAACCTAGAAAGTCTGTTGTGCCTTCTAAGCCTAGTGATGAGAACCTCTACTCCCCAATTATCCTAATCATGGGGCATGTGGATACTAGCAAAACCAAACTACTAGATTGTATTCGAGGTACTAATATTCAGGAGGGTGAGGCTGGCGGTATCACACAACAGATTGGTGCAATATACTTTCCTGCTGAGAATATACGTGAAAGAACGAAGGAATTGAAAGCTGATGCAAAGCTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACAAGTCATTTACTAACTTGAGGTCTGAGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTGGAGCAACAAACAATAGAATCACTAAATCTATTAAAAATGAGGAATACAAAATTCATTGTTGCCTTGAATAAGGTTGACAAGCTTTATGGGTGGAAGACATGTTGCGCAATGAAGCAGCAAACTAAGGATGTTCAAAATGATTTTAATATGAGGCTCACACAGATTATTACTCAATTCAAAGAACAGGGACTAAATATTGAGTTATATTATAAAAACAAAGAAATGGGAGAAACGTTCAGCATTGTGCCTACAAGTGCAATAAGGTCCTATAATGTAGATGGTGGATTCCTTGCTGGTGTTATGAATAAA 747 0.3842 MASSRSPVAYANAVVVDKNKKHDHDLNREPRKSVVPSKPSDENLYSPIILIMGHVDTSKTKLLDCIRGTNIQEGEAGGITQQIGAIYFPAENIRERTKELKADAKLKVPGLLVIDTPGHKSFTNLRSEGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTKFIVALNKVDKLYGWKTCCAMKQQTKDVQNDFNMRLTQIITQFKEQGLNIELYYKNKEMGETFSIVPTSAIRSYNVDGGFLAGVMNK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr185g00002 249 PRINTS GTP-binding elongation factor signature 112 122 IPR000795 GO:0003924|GO:0005525
Mupr185g00002 249 PRINTS GTP-binding elongation factor signature 128 139 IPR000795 GO:0003924|GO:0005525
Mupr185g00002 249 PRINTS GTP-binding elongation factor signature 164 173 IPR000795 GO:0003924|GO:0005525
Mupr185g00002 249 PRINTS GTP-binding elongation factor signature 48 61 IPR000795 GO:0003924|GO:0005525
Mupr185g00002 249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 244 IPR027417 -
Mupr185g00002 249 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 44 249 IPR000795 GO:0003924|GO:0005525
Mupr185g00002 249 FunFam Eukaryotic translation initiation factor 5B 38 241 - -
Mupr185g00002 249 CDD IF2_eIF5B 47 239 - -
Mupr185g00002 249 MobiDBLite consensus disorder prediction 18 36 - -
Mupr185g00002 249 Gene3D - 39 246 IPR027417 -
Mupr185g00002 249 NCBIfam small GTP-binding protein domain 48 196 IPR005225 GO:0005525
Mupr185g00002 249 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 35 239 IPR015760 -
Mupr185g00002 249 MobiDBLite consensus disorder prediction 18 39 - -
Mupr185g00002 249 Pfam Elongation factor Tu GTP binding domain 48 239 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr185g00002 Mupr-Chr185 26154 27669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr185g00002 32 238 Eukaryotic Initiation Factors Gene Family AT1G76810 78.605 9.65e-112 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr185g00002 K03243 - gmx:100814640 380.948