Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1852g00010 ATGGAGCCCATGGACATCGTTGGAAAATCAAAGGAAGATGCTTCCCTTCCTAAAGCAACAATGACAAAAATCATTAAAGAGATGTTACCCCCAGAAGTACGTGTTGCAAGAGATGCCCAAGATCTATTGATTGAGTGTTGTGTAGAGTTTATAAACCTCATCTCGTCAGAATCCAATGAAGTCTGTAACAGAGAGGAAAAACGGACAATAGCACCTGAGCATGTATTGAAGGCTCTGCAGGTACTTGGGTTCAGTGAGTACATTGAAGATGTTTATGGAGCATATGAACAGCACAAAATGGAGACCATGCAGGACTCTTTAAAGGGTGGTAAATGGAGCAATGGAGCTGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGGATGAATGGTGAAGCCATTGCTTCCAAGCAGCCAGATGCTGACCAAAGTTTAGATAGCTAA 471 0.4352 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPEVRVARDAQDLLIECCVEFINLISSESNEVCNREEKRTIAPEHVLKALQVLGFSEYIEDVYGAYEQHKMETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGEAIASKQPDADQSLDS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1852g00010 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Mupr1852g00010 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Mupr1852g00010 156 FunFam Negative cofactor 2 beta 6 143 - -
Mupr1852g00010 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Mupr1852g00010 156 Gene3D Histone, subunit A 4 146 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1852g00010 Mupr-Chr1852 66631 71312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1852g00010 1 149 CCAAT-DR1 Transcription Factor Family AT5G23090 82.550 1.40e-90 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr1852g00010 CBFD_NFYB_HMF 3.9e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1852g00010 K21751 - gmx:100807912 291.197