Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18481g00001 ATGGATGCATACAAGAAGAATATTGAGGGAAATAGTGAAGCCCAGTTAGGTGCTTTTGTTGATCCGCAGGTTTTGATGAGATCAGCCCTACAGCTCCAGGCCCACAAGCCCACTCAACACTCCGACGACGACGGAGAAGGAGCCTCCTCCGCCGGCCGCCGCCCTCGCGGCCGTCCTCCTGGCTCCAAGAACAAGCCCAAGCCGCCCGTCATAGTCACGCGCGACAGCCCCAACGCGCTGCACTCGCACGTGCTGGAGGTCTCCGCCGGTGCCGACGTGGTGGAGAGCCTCTCCGGCTACGCCCGGCGCCGAGGGAGAGGCGTGTGCGTGCTCAGAGGCTCCGGAACGGTGGCCAACGTCGCGCTCCGCCAGCCGGGGGGAAACGTGGTGACGCTTCACGGGCGGTTCGAGATAGTTTCCCTAACGGGGACGGTGCTCCCACCGCCGGCGCCACCGGGATCGGACGGGTTGTCGGTTTACTTGTCGGGGGCGCAGGGACAGGTGGTTGGGGGCATCGTGGTGCCGCCTCTGGTGGCTTCCGGTCACGTGGTGTTGGTGGCTGCTTCCTTTGCTAACGCCATGTTCGAAAGGTTACCCTTGCCCTTGAATCACCACGATGATGATGATCATGATCATGATGGTGATGATCAAGTTCCCCAAGAGGCACCACGTGGCATCACCGGAACTGGACAGGTGTCAGATGGAAGGAACTATCCCTTCTCGGCGTCGCTGCAGGGTGACCTATTTGGATGGGGTGGAAGTGCAACTGCGCTACCCAAACCTCCTCCTTTCTAG 795 0.6138 MDAYKKNIEGNSEAQLGAFVDPQVLMRSALQLQAHKPTQHSDDDGEGASSAGRRPRGRPPGSKNKPKPPVIVTRDSPNALHSHVLEVSAGADVVESLSGYARRRGRGVCVLRGSGTVANVALRQPGGNVVTLHGRFEIVSLTGTVLPPPAPPGSDGLSVYLSGAQGQVVGGIVVPPLVASGHVVLVAASFANAMFERLPLPLNHHDDDDHDHDGDDQVPQEAPRGITGTGQVSDGRNYPFSASLQGDLFGWGGSATALPKPPPF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18481g00001 264 MobiDBLite consensus disorder prediction 33 75 - -
Mupr18481g00001 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 201 - -
Mupr18481g00001 264 ProSiteProfiles PPC domain profile profile. 77 211 IPR005175 -
Mupr18481g00001 264 MobiDBLite consensus disorder prediction 202 237 - -
Mupr18481g00001 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 224 IPR014476 GO:0003680
Mupr18481g00001 264 MobiDBLite consensus disorder prediction 37 51 - -
Mupr18481g00001 264 MobiDBLite consensus disorder prediction 202 219 - -
Mupr18481g00001 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 191 IPR005175 -
Mupr18481g00001 264 Gene3D - 81 207 - -
Mupr18481g00001 264 FunFam AT-hook motif nuclear-localized protein 80 209 - -
Mupr18481g00001 264 CDD DUF296 83 190 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18481g00001 Mupr-Chr18481 3885 4679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18481g00001 48 200 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 73.780 6.19e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18481g00001 - - gmx:100778715 315.079