Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18476g00001 ATGGCCTTGGTGGTAGAAGATCAAGGTTTGCATGATATGAGCTTCTTGTGGGATCCCTCCAATTCTGATAACTCAGGTGAGAGTAAAGAAAACATGAAGCCACTAAACCAGAAAAAAGAAAGAGATGAAGCTCTCATGAACAAGAAACGAAATCGAGATAATGGTGAAGGAAAAGATGAAAAGTGTCGCGAATTTGATCATGAATTGCATATATGGACCGAGAGAGAAAGAAGGAAGAAAATGAGGAACATGTTCGCTGGTCTTCATGCTTTGCTTCCGCATCTTCCTTCTAAGGCAGATAAATCAACCATTGTGGATGAAGCAGTGATATACATAAAAAATCTACAGCAAACCCTCGAAAAGTTAGAGAAACAGAAACAAGAAAAGCTCCAACATGTCTCCTCCATTTTAGGGTGTGATTCATCATCCAATGCAATAATGGGAACGGGAACTTCCAATGCACTTTCAGTCCCTGGGCCGCAGCCAGCAGCATTTGATAAAACTTGGGCTGCTCCAAATATGGTCTTGAACATTTTTGGAGATGAAGCCCAATTCTCCATTTGTGCAGCCCATAAGCCAGGCCTCATGACCACCATCGCTTTCGTTCTCGAGAAGTACAAGATAGAGATCATTTCTGCCACCGTTTCGTCTAATGGGAATGCATCCATCGTTCAAGCCCATGGAAAACGAGCTTCACATCAATTCCTAGATGCAAATTCATTGGATGAAATTTACAAGCAAGCGGCAGGAGAGATTATGTTATGGGTCGCTTAA 774 0.4212 MALVVEDQGLHDMSFLWDPSNSDNSGESKENMKPLNQKKERDEALMNKKRNRDNGEGKDEKCREFDHELHIWTERERRKKMRNMFAGLHALLPHLPSKADKSTIVDEAVIYIKNLQQTLEKLEKQKQEKLQHVSSILGCDSSSNAIMGTGTSNALSVPGPQPAAFDKTWAAPNMVLNIFGDEAQFSICAAHKPGLMTTIAFVLEKYKIEIISATVSSNGNASIVQAHGKRASHQFLDANSLDEIYKQAAGEIMLWVA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18476g00001 257 CDD bHLH_AtbHLH_like 70 123 IPR045239 -
Mupr18476g00001 257 MobiDBLite consensus disorder prediction 15 31 - -
Mupr18476g00001 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 115 IPR011598 GO:0046983
Mupr18476g00001 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 134 IPR036638 GO:0046983
Mupr18476g00001 257 MobiDBLite consensus disorder prediction 13 60 - -
Mupr18476g00001 257 MobiDBLite consensus disorder prediction 32 60 - -
Mupr18476g00001 257 Gene3D - 63 136 IPR036638 GO:0046983
Mupr18476g00001 257 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Mupr18476g00001 257 Coils Coil 105 132 - -
Mupr18476g00001 257 SMART finulus 73 121 IPR011598 GO:0046983
Mupr18476g00001 257 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 21 256 IPR044278 GO:0003700|GO:0006355|GO:0009960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18476g00001 Mupr-Chr18476 192 3915 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18476g00001 8 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.755 2.41e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr18476g00001 HLH 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18476g00001 - - gmx:102665879 369.392