Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18461g00001 ATGGAAGCTAACGGGATTGATGAACTTAAGATACCTTTGTTGCAGACTTCAGAAGACGTTGCCGTTAGGACTGTTACGTTCCAAATAAGTGATGTTAAGTGTTCTTCCTGTGTCAATTCTGTTGAGTCTCTCGTTAGGAACCTTAACGGCGTCAATAGCGTCGCCGTTTCGCCACTTGATGGCCGAGCCGCAATCAAGTTTGTCCCCAAGTTCGTTACCGCGAAACAAATAAAAGAAAGGATAGAGGAGAGTGGGTTTGGAGTTAATGAGCTTCATGAGCAGGACATAGCAGTGTGCCGAGTGAGGATTAAAGGAATGGCATGCACAAGCTGCTCCGAGTCTGTTGAAAATGCCCTTCAAATGGTTGAAGGGGTGAAGAAGGCAATTGTTGGTCTTGCTTTGGAGGAGGCAAAAGTGCACTTTGATCCTAACCTCACCAATGCCAACAAGATAATTGAGGCTGTAGAAGATGCGGGTTTTGGGGCTGATCTTATTAGCTCTGGGAATGATGCTAACAAAGTGCATCTGAAACTCGAAGGGGTTGATTCCACAGAAGATGTAAACGTAGTAATGTCTTCTCTTGAGTTAGCTGCAGGGGTGAACCATGTTGAGATGGATTTGTCAGAACATAAGGTTACAGTTAGCTATGATCCAGACATTACAGGTCCAAGGTCTCTCATTCACTGTGTTCAGGAAAGTAGCTGTGGCTCCAAGAGGTATCAAGCAACCTTGTACTCTCCTTCAGGGCAAAGAGAAAGGGATAAGGTGAATGAAATTCGTACGTATAGGGACCAATTTTTGTTCAGCTGCTTGTTTTCTGTTCCTGTGTTTGTATTTGCCATGGTGCTTCCCATGCTTCCTCCTTATGGCAACTGGTTAAACTACAAGATCCAGAATATGCTTACTCTTGGGTTGTTTTTAAGATGGATACTTAGCACGCCTGTGCAGTTCATAGTTGGCAAAAGGTTCTATGTGGGATCATATCATGCACTGAAGCGAAAATCTGCTAACATGGATGTGCTGGTTGCGCTAGGCACAAATGCTGCTTATTTTTACTCTCTCTATATTTTAATAAAAGCACTGACTTCAGATACATTTCAAGGACAAGATTTCTTTGAGACAAGTTCCATGTTGATATCCTTTATTCTATTAGGGAAATATTTGGAAATTGTGGCTAAAGGGAAAACATCAGATGCTTTAGGAAAGCTGACTCAACTTGTTCCCGATAAAGCTTATTTGGTAGAAATTGATAACGATGGAAATATCCTCACAGAGACTGAAATTGACACCCAACTCATACAAAAGAATGACATGATTAAGATTGTTCCCGGGGCCAAAATTCCCGTTGATGGAATTGTTATAAAAGGACAAAGCTATGCAAATGAAAGTATGATCACTGGGGAGGCAAGACCTGTTGATAAAGGTCCAGGAGACAAGGTTATCAGTGGAACCATCAATGAGAATGGCTGCTTACTGGTTAAGGCCACACATGTTGGATCAGACACTGCACTTTCTCAAATAGTTCAACTTGTTGAAGCTGCTCAACTGGCCAAAGCACCAGTTCAAAAACTTGCTGACCATATTTCAAGGGTGGTTGTTGTAGCACTAATAACTTGGCTTGGATGGTTCATTCCTGGGGAAGCTGGTATTTACCCTAAACATTGGATACCAAAAGCAATGGATGCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGCTGGTTGTTGCTTGCCCATGTGCTCTGGGTCTTGCAACACCAACTGCAGTCATGGTTGCTTCAGGCATGGGTGCTTCTCAAGGCGTTCTCATCAAGGGTGGAGATGCACTGGAAAAGGCACACAAGGTAAAAATTGTTGTGTTTGATAAGACCGGGACACTAACAGTTGGGAAGCCAGTGGTAGTTAATGCAGTGCTGTTTTCTGAATTTTCTATGGAGGAGTTATGTGATACGACAATTGCTGTGGAGGCAAGTAGCGAGCACCCATTAGCAAAAGCTGTTGTAACACATGCAAAGAGGCTGCGCCAGAAATTTGGTTCTTCCACAGAGGAAGTTCCAGATGTGGATGATTTTGAAGTACACATGGGAGCTGGTGTAAGTGGAAAAGTTGGTGCTAAAACAGTTGTAGTTGGAAACAAGAGACTGATGCATGCTTGTAATGTTCCAATACGTTCTGAAGTTGAGAAGTACATCTCTGAAAATGAAATTCTGGCTCGAACTTGCGTTTTAGTTTCAATTGATGGAAAGATTGCTGGTGCATTCTCTGTAACTGATCCTGTAAAACCAGAGGCTAAACGTGTCATATCTTTTCTTCACTCCATGGGCATCTCAAGCATCATAGTGACTGGTGATAACTATGCTACAGCAACTGCTATTGCAAATGAAGTGGGTATTGATGAGGTCTTTGCAGAAACAGATCCGGTGGGCAAAGCTGATAAGGTGAAAGACTTGCAGATGAAAGGAATGACTGTGGCAATGGTAGGTGATGGAATAAACGACTCGCCAGCGTTGGTTGCTGCTGATGTTGGCATGGCAATTGGTGCTGGAACTGACATAGCTATAGAAGCAGCTGATATAGTTCTGGTCAAAAGCAGTTTGGAAGATGTGATAACAGCAATAGATCTATCTAGAAAGACCATGTCGCGCATCCGGCTGAACTATATCTGGGCTCTTGGTTACAACATTCTAGGCATGCCAATTGCTGCTGGAGTATTGTACCCCTATGCTGGAATCAGATTGCCCCCATGGCTTGCTGGTGCTTGCATGGCTGCTTCCTCTCTTAGTGTGTCCACGATTTGGCCAGAAGACTCAGAAATTTGA 2820 0.4326 MEANGIDELKIPLLQTSEDVAVRTVTFQISDVKCSSCVNSVESLVRNLNGVNSVAVSPLDGRAAIKFVPKFVTAKQIKERIEESGFGVNELHEQDIAVCRVRIKGMACTSCSESVENALQMVEGVKKAIVGLALEEAKVHFDPNLTNANKIIEAVEDAGFGADLISSGNDANKVHLKLEGVDSTEDVNVVMSSLELAAGVNHVEMDLSEHKVTVSYDPDITGPRSLIHCVQESSCGSKRYQATLYSPSGQRERDKVNEIRTYRDQFLFSCLFSVPVFVFAMVLPMLPPYGNWLNYKIQNMLTLGLFLRWILSTPVQFIVGKRFYVGSYHALKRKSANMDVLVALGTNAAYFYSLYILIKALTSDTFQGQDFFETSSMLISFILLGKYLEIVAKGKTSDALGKLTQLVPDKAYLVEIDNDGNILTETEIDTQLIQKNDMIKIVPGAKIPVDGIVIKGQSYANESMITGEARPVDKGPGDKVISGTINENGCLLVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADHISRVVVVALITWLGWFIPGEAGIYPKHWIPKAMDAFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVKIVVFDKTGTLTVGKPVVVNAVLFSEFSMEELCDTTIAVEASSEHPLAKAVVTHAKRLRQKFGSSTEEVPDVDDFEVHMGAGVSGKVGAKTVVVGNKRLMHACNVPIRSEVEKYISENEILARTCVLVSIDGKIAGAFSVTDPVKPEAKRVISFLHSMGISSIIVTGDNYATATAIANEVGIDEVFAETDPVGKADKVKDLQMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLVKSSLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGVLYPYAGIRLPPWLAGACMAASSLSVSTIWPEDSEI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18461g00001 939 SFLD p-type atpase 602 879 IPR044492 -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 774 784 - -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 752 763 - -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 620 634 - -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 827 846 - -
Mupr18461g00001 939 PRINTS P-type cation-transporting ATPase superfamily signature 850 862 - -
Mupr18461g00001 939 Gene3D - 98 168 - -
Mupr18461g00001 939 ProSiteProfiles Heavy-metal-associated domain profile. 97 163 IPR006121 GO:0046872
Mupr18461g00001 939 CDD P-type_ATPase_Cu-like 266 929 - -
Mupr18461g00001 939 FunFam Copper-transporting ATPase 1, putative 393 515 - -
Mupr18461g00001 939 Gene3D - 627 706 IPR023299 GO:0000166
Mupr18461g00001 939 Gene3D - 707 758 IPR023299 GO:0000166
Mupr18461g00001 939 FunFam Copper-transporting ATPase HMA5 96 167 - -
Mupr18461g00001 939 ProSiteProfiles Heavy-metal-associated domain profile. 172 238 IPR006121 GO:0046872
Mupr18461g00001 939 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 18 929 - -
Mupr18461g00001 939 CDD HMA 101 162 IPR006121 GO:0046872
Mupr18461g00001 939 SFLD C1.7: P-type atpase like 602 879 - -
Mupr18461g00001 939 Pfam Heavy-metal-associated domain 26 86 IPR006121 GO:0046872
Mupr18461g00001 939 Pfam Heavy-metal-associated domain 100 160 IPR006121 GO:0046872
Mupr18461g00001 939 SUPERFAMILY HMA, heavy metal-associated domain 94 168 IPR036163 GO:0046872
Mupr18461g00001 939 Gene3D - 393 515 - -
Mupr18461g00001 939 SUPERFAMILY HMA, heavy metal-associated domain 168 233 IPR036163 GO:0046872
Mupr18461g00001 939 CDD HMA 26 88 IPR006121 GO:0046872
Mupr18461g00001 939 ProSitePatterns Heavy-metal-associated domain. 29 57 IPR017969 GO:0046872
Mupr18461g00001 939 NCBIfam HAD-IC family P-type ATPase 378 904 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr18461g00001 939 SUPERFAMILY Calcium ATPase, transduction domain A 425 511 IPR008250 -
Mupr18461g00001 939 FunFam Probable copper-transporting ATPase HMA5 746 884 - -
Mupr18461g00001 939 Gene3D - 18 89 - -
Mupr18461g00001 939 ProSitePatterns E1-E2 ATPases phosphorylation site. 622 628 IPR018303 -
Mupr18461g00001 939 ProSiteProfiles Heavy-metal-associated domain profile. 23 89 IPR006121 GO:0046872
Mupr18461g00001 939 ProSitePatterns Heavy-metal-associated domain. 103 132 IPR017969 GO:0046872
Mupr18461g00001 939 Gene3D - 587 884 IPR023214 -
Mupr18461g00001 939 SUPERFAMILY Calcium ATPase, transmembrane domain M 370 612 IPR023298 -
Mupr18461g00001 939 SUPERFAMILY HAD-like 618 929 IPR036412 -
Mupr18461g00001 939 Pfam haloacid dehalogenase-like hydrolase 616 841 - -
Mupr18461g00001 939 NCBIfam copper ion binding protein 101 161 IPR006122 GO:0005507
Mupr18461g00001 939 NCBIfam copper ion binding protein 25 88 IPR006122 GO:0005507
Mupr18461g00001 939 NCBIfam heavy metal translocating P-type ATPase 338 930 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mupr18461g00001 939 Gene3D - 170 246 - -
Mupr18461g00001 939 FunFam ATPase copper transporting beta 20 93 - -
Mupr18461g00001 939 Pfam E1-E2 ATPase 408 598 - -
Mupr18461g00001 939 SUPERFAMILY HMA, heavy metal-associated domain 22 92 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18461g00001 Mupr-Chr18461 2739 10709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18461g00001 19 929 Primary Pumps ATPases AT1G63440 56.725 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18461g00001 K17686 - gmx:100793894 1697.56