Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18429g00001 ATGGCTAACGTTAATGCGACTGTTCCGTTTCCCTCAAACCTTTTGCCAGGGGATGGAAGCCCTGAATGGATGAGCAAAGCAGACAATGCATGGCAGCTGGTAGCTGCAACACTGGTGGGTCTGCAAAGTGTTCCAGGGCTCATAATCTTGTATGGTGGAGCTGTTAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTCTATGCTTTTGCTTGTGTCTTCTTCTGTTGGGTTGTGTGGGGATACAGAATGTCTTTTGGTGACCAGCTTCTTCCTTTCTGGGGAAAGCCTGCTGTGGCACTGGATGAGGTTTATCTTTTCAAGAAAGCCTTCTTGGGGGCCTTCCCAAACGCCACAATGGTCTATTTCCAGTGTGTCTTTGCAGCCATTACTTTGATTCTCATAGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGTTGTTTGTACCTTTGTGGCTCACATTCTCTTACACCTTCACTGCATTCAGCATATGGAGTACTAGTGGCTTTCTATCCAAAATGGGGATAATAGACTACTCTGGCGGATATGTCATCCATTTGTCTTCTGGGGTTGCTGGATTCACAGCCGCATTTTGGGTTGGACCGAGGCTAAACAAGGACAGGGAAAGGTTTCCTCCAAACAACATCCTTCTTATGCTGGCAGGGGCAGGGCTGTTGTGGATGGGGTGGACGGGGTTCAACGGAGGAGATCCATACACAGTGAACATGGATGCTTCCCTTGCTGTCCTCAACACCCATGCATGCACTGCCACCAGCTTGCTCACTTGGGTCATCCTTGATGTTCTCTTTTTCCGAAAGCCTTCCGTCATTGGAGCTGTTCAAGGCATGATTACTGGTTTGGTTTGCATAACCCCTGCTGCAGGTGTTGTGCAGGGATGGGCAGCACTTATAATGGGAGTGTTCTCTGGCTCAATTCCTTGGTTCACCATGATGGTGATCCATAAGAGATCAAAGCTACTGCAGAATGTTGATGATACAATGGCAGTGTTGCACACTCATGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCTGAGCCAAGACTTAACAGATTGTTCTATGGAAATGCAAATCAATACGTTGGTCTATTTTACGGTTTCAGTTCGAACATGGCTAGTACTGGATTCAGGCAAATAGGAATCCAAATCCTTGGGATTTTATTTGTTATCTTTGTTAACGTTGTCAGCACAAGTTTGATTTGCCTCTTCATTCGAATTTTTGTTCCATTAAGAATGTCTGAAGAGGATATGGAGATAGGTGATGAGGCTGCTCATGGGGAAGAAGCTTATGCGATCTGGGGTCAGGGCGATAAGCTTGAAAATTCAAGTTCTAAGTATGGAAGTTCATTATATGATGATGTTGAAGCTGGGGCCCCCAAGAAGAAGCGTGGTGGCACGGTTGAGATGATGTAA 1455 0.4653 MANVNATVPFPSNLLPGDGSPEWMSKADNAWQLVAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDQLLPFWGKPAVALDEVYLFKKAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSTSGFLSKMGIIDYSGGYVIHLSSGVAGFTAAFWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVNMDASLAVLNTHACTATSLLTWVILDVLFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALIMGVFSGSIPWFTMMVIHKRSKLLQNVDDTMAVLHTHAIAGTLGGLLTGLFAEPRLNRLFYGNANQYVGLFYGFSSNMASTGFRQIGIQILGILFVIFVNVVSTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVEAGAPKKKRGGTVEMM 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18429g00001 484 ProSitePatterns Ammonium transporters signature. 182 207 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mupr18429g00001 484 Gene3D Ammonium transporter AmtB like domains 17 448 IPR029020 -
Mupr18429g00001 484 Pfam Ammonium Transporter Family 30 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mupr18429g00001 484 PANTHER AMMONIUM TRANSPORTER MEP2 13 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mupr18429g00001 484 PRINTS Rhesus blood group protein signature 252 274 IPR002229 GO:0005886
Mupr18429g00001 484 PRINTS Rhesus blood group protein signature 221 239 IPR002229 GO:0005886
Mupr18429g00001 484 PRINTS Rhesus blood group protein signature 125 141 IPR002229 GO:0005886
Mupr18429g00001 484 NCBIfam ammonium transporter 28 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mupr18429g00001 484 SUPERFAMILY Ammonium transporter 23 426 - -
Mupr18429g00001 484 FunFam Ammonium transporter 13 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18429g00001 Mupr-Chr18429 1197 3733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18429g00001 119 478 Inorganic Solute Cotransporters AT2G38290 61.111 1.57e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18429g00001 K03320 - gmx:100787856 901.353