Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr183g00002 ATGAACTCCACCTCTTCGAATTCTCAGTCAATGGCGGCATCAGTAGCACCCAATGATGGGTCTGGCAAGAAGGTAAGGAAGCCCTACACCATAACCAAGTCCAGAGAGAGTTGGACTGAGGAAGAGCACGACAAGTTTCTCGAAGCTCTTCAACTATTTGACAGGGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAAACAGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTGAAAGTTCAAAAGAATGGGACTGTTGCACATGTGCCTCCTCCCCGTCCTAAGCGCAAAGCTGCTCATCCTTACCCACAAAAGGCATCAAAAAATGGTTTGCTTCTATTTGAGATGGTGATATTCTCTGTCCCTATAGGTGTATCATGCATCCCTGACATGCTACTTTCTGGTTTTCCAGTTTTGGTGCCACTACCAGCTTCCATTGGTTATGCTTCTTCACCAAATACCCTAGCACCTGGTTATGCCACATGGGATGAAACTTCCCTGCTGATGAATGCCGGAGCCAATAAATCCATGACCTGTCAGGATGAACTCAATAATCATCATCATGGAAATGAAGGCACGCATACTTCTTTTTATTGTTGTTTGTTTGAAGCAATAGTCTACATTTACTGTACCAAATGGAACTGTCCACCACTTATTATGTTATATGACGTTACTGATTCAGCTGATATTGGATCAAAGGGGATAACACAGATCACCAACAGCAGTCTTAGTGGTGTTGGAAACTCTACTAGAACGCTACCAACTTCTGAGATACCAAAGCAAGGGAAACAAGCTCCGGTGCTTCATGGTTTGCCAGATTTTGCTGAAGTTTACAGTTTCATTGGAAGTGTTTTTGATCCAGATACAGACAACCATGTCCACAAGTTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGACTTTGAACCCATCAAGAAGGTAATGTCAACATATGATGTCAATACCATGGCAGTAGGGATGGCTGCAGGAATTGATGTCAAGAAGCAGACAAATGATCTATCATGTAGGTCAAATTTGGATGGAAGACTGAGGTTTTGCTCGGCCAGCAGAAGGGCATGGGAGTATCTTGCACCCGCTGTAAAGCCTGTAAAAATGTAA 1173 0.4246 MNSTSSNSQSMAASVAPNDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNGLLLFEMVIFSVPIGVSCIPDMLLSGFPVLVPLPASIGYASSPNTLAPGYATWDETSLLMNAGANKSMTCQDELNNHHHGNEGTHTSFYCCLFEAIVYIYCTKWNCPPLIMLYDVTDSADIGSKGITQITNSSLSGVGNSTRTLPTSEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPDTDNHVHKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKKVMSTYDVNTMAVGMAAGIDVKKQTNDLSCRSNLDGRLRFCSASRRAWEYLAPAVKPVKM 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr183g00002 390 ProSiteProfiles SANT domain profile. 33 86 IPR017884 -
Mupr183g00002 390 CDD SANT 37 80 IPR001005 -
Mupr183g00002 390 PANTHER SWI/SNF COMPLEX-RELATED 9 322 - -
Mupr183g00002 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 84 IPR017930 -
Mupr183g00002 390 MobiDBLite consensus disorder prediction 1 39 - -
Mupr183g00002 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 33 82 IPR006447 GO:0003677
Mupr183g00002 390 ProSiteProfiles Myb-like domain profile. 30 80 IPR001005 -
Mupr183g00002 390 Gene3D - 38 85 - -
Mupr183g00002 390 Pfam Myb-like DNA-binding domain 35 80 IPR001005 -
Mupr183g00002 390 FunFam protein REVEILLE 6 isoform X1 37 85 - -
Mupr183g00002 390 MobiDBLite consensus disorder prediction 1 16 - -
Mupr183g00002 390 SUPERFAMILY Homeodomain-like 29 85 IPR009057 -
Mupr183g00002 390 SMART sant 34 82 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr183g00002 Mupr-Chr183 12090 17929 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr183g00002 Myb_DNA-binding 6.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr183g00002 - - gmx:100797466 484.952