Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1839g00005 ATGGCAGGGCAGAGAAGGTCAAGAGCTTCAAAGTTCACAGAGAACGAGGTTAATGATCTTGTGTCTAGGTTACAAGTTCTGCTTCCGCAAGTGAACCAAAGAAGCAACTCAAGGCAATCAGCGTCCAAGATCTTGCAGGAAACCTGCTGTCACATTAGGAGGCTTCAGAAAGAGGTGGAACAGCTCAGTGAGAGGCTATCAGAGCTTATGGATTCTGCTGATATCAGTGACATTGACAGAAGAACTTTACAAAACTTTTTGCAACAATAA 270 0.437 MAGQRRSRASKFTENEVNDLVSRLQVLLPQVNQRSNSRQSASKILQETCCHIRRLQKEVEQLSERLSELMDSADISDIDRRTLQNFLQQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1839g00005 89 Coils Coil 45 72 - -
Mupr1839g00005 89 Pfam Helix-loop-helix DNA-binding domain 16 56 IPR011598 GO:0046983
Mupr1839g00005 89 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 72 IPR036638 GO:0046983
Mupr1839g00005 89 Gene3D - 14 89 IPR036638 GO:0046983
Mupr1839g00005 89 PANTHER DNA BINDING PROTEIN 1 89 IPR044172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1839g00005 Mupr-Chr1839 43834 46488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1839g00005 5 74 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 52.113 1.39e-18 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr1839g00005 HLH 0.00015 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1839g00005 - - cam:101497180 129.798