Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18397g00001 TATCCATATCAGCTTACTAGGTGCTTGAAAGAGATGGGGAAGACAAGCAAATGGCTTAGAAACTTGTTGACAGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCGAATACCAACCTGAATTCTTCTTCAAATGGAACAGAAAATTCAACCACTCCAAGTTCCACAACCCCAAAGGAGAAAAAGAGGTGGAGTTTTAGAAGATCATCAGCCTCAGCCACTGCCACTGCCACAACCACACCAACAACAACAACAACTTCCAAGGAATTGAATTTTGTAGAACCAAATGTCACTGCTTCACAGACAGTGAAAACTGACACTGATAATCAGGATGAGCAGATGAAGCATGCCATGGCTGTGGCTGCTGCCACTGCAGCAGCAGCTGATGCTGCAGTGGCAGCTGCTCAGGCTGTAGCTGCTGTTATCCGTTTGACTTCTGCTTCCAATGGAACATCTAAAAGCATTGAAGAAGCTGCTGCCATTAAAATCCAATCTGTCTTTCGGTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTAAGAGGATTGGTGAAGTTGCAGGCACTGGTAAGGGGTCACTTGGTCAGAAAACAAGCCAAGGCCACATTGAGATGCATGCAGGCTCTGGTGACAGCACAAGCCAGAGTTCGTGCTCAGAGGTTCCTAATGGTGTCAGAAGGAAAGCCTAATCAAAAGCACAGAAATGCTACAGATGATGATTTGTTCAGGCATATATATAATGAAATGGACAGAGGCTTGGAAGACAACATCAAGATTGTAGAAATGGATGTTTGTGAATCAAAAGGTAACTCCAGAAGCAGAAGCAGCAGTGTATATCATCATGGACATCAAGAACAATGTGATCATAGATTTTCCACACATTATTCAACAAATGGTTCCTACTCAAAGGAAGAAAGCTACAAAGTATCACCAGCTCCATCAGCATTGACAGAGTTGAGTCCAAGAGCCTGCAGTGGCCATTTTGAGGACTGTTTCAGCACAGCACAAAGCAGTCCCCAGTTCTACACTGCTGTGTCAAGATCAGACGATTCAAAGCACCCTTTTGCTTTCCCTAGGCCAGCTTATGCAGAATCTATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACTGAATCATCAAGGGCTAAAGTCAGATCACACAGTGCACCAAAACAAAGACCAGATTCATGTGAGAGACAACCGAGCCGGCGAAGAGTTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAGTGAGAATGCAAAGGTCATCTTCTCATGTCGGTGCCACTGCCCATAACTACCAATATCCATGGTCAATTAAGCTTGATAGATCCGCAGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAACTATTGCAGATCTCTTGTTGGATATGACCGAGTAATGGTACCACAACAATTCATAAATTAA 1458 0.439 YPYQLTRCLKEMGKTSKWLRNLLTGKKDKEKEKEKSNTNLNSSSNGTENSTTPSSTTPKEKKRWSFRRSSASATATATTTPTTTTTSKELNFVEPNVTASQTVKTDTDNQDEQMKHAMAVAAATAAAADAAVAAAQAVAAVIRLTSASNGTSKSIEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARVRAQRFLMVSEGKPNQKHRNATDDDLFRHIYNEMDRGLEDNIKIVEMDVCESKGNSRSRSSSVYHHGHQEQCDHRFSTHYSTNGSYSKEESYKVSPAPSALTELSPRACSGHFEDCFSTAQSSPQFYTAVSRSDDSKHPFAFPRPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSCERQPSRRRVSVEGRNVPRPVRMQRSSSHVGATAHNYQYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVGYDRVMVPQQFIN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18397g00001 485 ProSiteProfiles IQ motif profile. 180 207 IPR000048 GO:0005515
Mupr18397g00001 485 SMART iq_5 178 199 IPR000048 GO:0005515
Mupr18397g00001 485 SMART iq_5 155 177 IPR000048 GO:0005515
Mupr18397g00001 485 Gene3D - 154 204 - -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 38 59 - -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 383 428 - -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 68 107 - -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 386 413 - -
Mupr18397g00001 485 Pfam Protein of unknown function (DUF4005) 353 412 IPR025064 -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 23 37 - -
Mupr18397g00001 485 PANTHER IQ-DOMAIN 5-RELATED 12 411 - -
Mupr18397g00001 485 MobiDBLite consensus disorder prediction 23 110 - -
Mupr18397g00001 485 ProSiteProfiles IQ motif profile. 156 184 IPR000048 GO:0005515
Mupr18397g00001 485 Pfam IQ calmodulin-binding motif 183 199 IPR000048 GO:0005515
Mupr18397g00001 485 Pfam IQ calmodulin-binding motif 158 176 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18397g00001 Mupr-Chr18397 5220 7641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18397g00001 12 485 IQD Protein Family AT4G14750 44.737 2.22e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18397g00001 - - gmx:100817667 695.271