Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1838g00001 ATGGAGAAAATGGCACTCACTACTTTCCACCACGCCTCTCTCTTCTCCACTCCTCCAAACACATCCTTTCAGCCCTTCTTCTCTAACCAACTACGTCGCCTCCCCTTTTTTTCTTCTCCTTCTTTATCCGCCGCCAAACGATTCTCTTCCTTCACTTGCAGGCCCGTTAACTGTTCCGTTTCCGAAGCCACGGAACCCAAAACTGCTGAGAAGAAGAGGCAGTTGCTGAGAAGAGGGGACGTGAGAAACATAGCCATTGTTGCTCATGTTGACCACGGAAAAACTACTCTCGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGATAATCAATTTGTTCAGGAAAGGATAATGGACTCGAATGATTTGGAGCGTGAAAGAGGAATCACAATACTGAGTAAAAATACATCTGTCACCTATAAAGACACGAAGATTAATATAATAGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTGGAGCGCATCTTAAATATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTAAAGAAGGCTTTAGAGTTTGGTCATTCAGTTGTTGTTGTTGTGAATAAAATAGATAGGCCTTCTGCTCGCCCAGATTATGTCGTCAACGCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGACGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCAAGCAGGATTGTCTCCTGAAAATCTGGCAGAAGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATCCCTGGTCCACGTATTGACAAAGATGGTGCACTTCAAATGCTTGTTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGGCGCGTGCAAGCTGGAGTTTTAGAAAAAGGCATGGATGTTCGAGTATGTACATCAGAAGATTCATGTAGATTTGGAAGAATTAGTGAGCTTTATGTTTATGACAAATTCAATAGGGTCCCTGCAGATAGAGTAGAGGCAGGTGATATATGTGCAGTATGTGGAATTACTGATATTCAGATTGGGGAGACTATTGCTGATAAAGTATCAGGGAAGCCGCTACCTTCCATCAAGGTGGAAGAACCAACAGTTAAAATGTCTTTCTCCATAAACACATCGCCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGCAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAACGGAATCTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACATTCGTTGTCAGTGGGCGTGGAACTTTGCATATCACTATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGACCTCCCAAAGTTATCAACAAGGTGGTGAATGAAAAACTGTTGGAACCGTATGAGATTGCAACTGTGGAGGTACCAGAAGAGCACATGGGAGCTGTTGTTGAACTTCTTGGAAAGAGACGAGGACAAATGTTTGATATGGAAGGAGTTGGATCAGAAGGAACTACACTACTCAAATATAAGATCCCAACCCGTGGCCTTCTTGGATTGCGGAATTCAATTTTAACTGCGTCCCGAGGGACAGCTATTCTAAACACCATCTTTGATAGCTATGGGCCTTGGGCTGGTGACATTAATACTCGGGATCAAGGCTCGCTGGTTGCTTTTGAGGATGGATCAAGTACTTCTTACGCAATCTCTAGTTCGCAGGAGAGGGGACAGATGTTTATTGGTCCTGGAGTGGAAGTTTATAAAGGCCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCTTTGAATGTTTGTAAGAAGAAAGCTGCAACCAACATACGTTCCAACAAGGAACAAACAGGTGACCAAGTCAAGGCACCCGTGCTTGTGATTCTTGATACACCATTGGACTATAGTTTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCGCAAGTATCCGAATGTGCAAGAATCCAAAATTAACAAAGAAAACAAGTCTCCAAATATTAGCAGTGAGGAACATGAAGATATTAATTCTTCGTCATATGAACTCGGGTCCAGCAAGGCCCGGTTAA 2124 0.4256 MEKMALTTFHHASLFSTPPNTSFQPFFSNQLRRLPFFSSPSLSAAKRFSSFTCRPVNCSVSEATEPKTAEKKRQLLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDYVVNATFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLEKGMDVRVCTSEDSCRFGRISELYVYDKFNRVPADRVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKVVNEKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGDINTRDQGSLVAFEDGSSTSYAISSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTGDQVKAPVLVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKLTKKTSLQILAVRNMKILILRHMNSGPARPG 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1838g00001 707 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 78 249 - -
Mupr1838g00001 707 Gene3D bipa protein 559 647 IPR042116 -
Mupr1838g00001 707 SUPERFAMILY Translation proteins 227 374 IPR009000 -
Mupr1838g00001 707 Pfam Elongation factor Tu domain 2 295 364 IPR004161 GO:0005525
Mupr1838g00001 707 PRINTS GTP-binding elongation factor signature 147 157 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 PRINTS GTP-binding elongation factor signature 83 96 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 PRINTS GTP-binding elongation factor signature 127 135 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 PRINTS GTP-binding elongation factor signature 199 208 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 Gene3D - 465 558 - -
Mupr1838g00001 707 CDD BipA_TypA_II 281 374 IPR047042 -
Mupr1838g00001 707 Gene3D - 79 274 IPR027417 -
Mupr1838g00001 707 SUPERFAMILY EF-G C-terminal domain-like 379 463 IPR035647 -
Mupr1838g00001 707 Pfam Elongation factor G C-terminus 472 557 IPR000640 -
Mupr1838g00001 707 FunFam GTP-binding protein TypA 382 486 - -
Mupr1838g00001 707 Gene3D Elongation Factor G (Translational Gtpase), domain 3 382 674 - -
Mupr1838g00001 707 SMART EFG_C_a 471 560 IPR000640 -
Mupr1838g00001 707 FunFam GTP-binding protein TypA 78 274 - -
Mupr1838g00001 707 CDD BipA_III 381 459 IPR047043 -
Mupr1838g00001 707 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 120 135 IPR031157 -
Mupr1838g00001 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 281 IPR027417 -
Mupr1838g00001 707 Gene3D Translation factors 275 375 - -
Mupr1838g00001 707 CDD BipA_TypA_C 474 553 IPR035651 -
Mupr1838g00001 707 FunFam GTP-binding protein TypA 275 375 - -
Mupr1838g00001 707 SUPERFAMILY EF-G C-terminal domain-like 474 589 IPR035647 -
Mupr1838g00001 707 CDD TypA_BipA 80 273 IPR047041 -
Mupr1838g00001 707 Pfam Elongation factor Tu GTP binding domain 81 271 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 79 274 IPR000795 GO:0003924|GO:0005525
Mupr1838g00001 707 NCBIfam translational GTPase TypA/BipA 81 676 IPR006298 GO:0003924|GO:0005525
Mupr1838g00001 707 FunFam GTP-binding protein TypA 465 558 - -
Mupr1838g00001 707 NCBIfam small GTP-binding protein domain 82 212 IPR005225 GO:0005525
Mupr1838g00001 707 FunFam GTP-binding protein TypA 559 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1838g00001 Mupr-Chr1838 2133 11085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1838g00001 81 208 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 5.44e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1838g00001 K06207 - gmx:100785222 1221.07