Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18373g00001 ATGAGAAAACCTTGTTGTGACAAAGAAGGCACAAACAAAGGTGCTTGGTCCAAGCAAGAGGACCAAAAGCTGTGTGATTACATCCGAGCACATGGTGCAGGACGTTGGTGTTCCCTCCCCAAGGCTGCAGCACTCAAAACTTACATACAAATTGGACATGCATGCATGCGGTTGTCAGGACTACATCGTTGTGGCAAAAGCTGTAGGTTGCGATGGATAAACTATTTACGACCAAACATTAAACGCGGCAACTTTTCCCAGGATGAAGAAGACCTCATCATTAAACTCCATGCCCTCCTTGGCAACCGGAGGATTGTAAGAAGTCTTTCTGTCCTAGATAAAGGAAATGAATTTGATTTTGTGGGATATGGTGTTAGGTGGTCACTGATAGCTGGAAGGTTGCCCGGTCGCACAGATAACGAGGTGAAGAACTATTGGAATTCTCACATACGCAGAAAGTTAATTAAGATGGGAATTGATCCAAATAACCACAGGCTAAACCAAAGCTTCCCTGTTGCAAAAGCTTGTAATGTTTCAGAAGCCACTAGTGCACAATCATCTGGCTCCATGGTCACACAGCATAGAGTCCCTTTCATCAAATCCTGTGGTTCTGCCAATGATAGGATTTCGGACACACATAGTTGTCTTGTAGAAGAAACATCCCACTTAAATCTTGACCTAACCATTGCTTTCCCTTCACCTACACATGCTCTTGTGCAACACAAATGTAATAAACCTACTTCTCAGTGCACAAACACTAGGAACATCCATGAGGATTCCGCCCCTACCGGCCTTCTTCTCTTTCTATAA 810 0.4395 MRKPCCDKEGTNKGAWSKQEDQKLCDYIRAHGAGRWCSLPKAAALKTYIQIGHACMRLSGLHRCGKSCRLRWINYLRPNIKRGNFSQDEEDLIIKLHALLGNRRIVRSLSVLDKGNEFDFVGYGVRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHRLNQSFPVAKACNVSEATSAQSSGSMVTQHRVPFIKSCGSANDRISDTHSCLVEETSHLNLDLTIAFPSPTHALVQHKCNKPTSQCTNTRNIHEDSAPTGLLLFL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18373g00001 269 Pfam Myb-like DNA-binding domain 13 76 IPR001005 -
Mupr18373g00001 269 Pfam Myb-like DNA-binding domain 82 149 IPR001005 -
Mupr18373g00001 269 Gene3D - 84 154 - -
Mupr18373g00001 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 76 IPR017930 -
Mupr18373g00001 269 ProSiteProfiles Myb-like domain profile. 8 76 IPR001005 -
Mupr18373g00001 269 SUPERFAMILY Homeodomain-like 13 151 IPR009057 -
Mupr18373g00001 269 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 206 - -
Mupr18373g00001 269 SMART sant 12 78 IPR001005 -
Mupr18373g00001 269 SMART sant 81 152 IPR001005 -
Mupr18373g00001 269 Gene3D - 13 81 - -
Mupr18373g00001 269 CDD SANT 84 150 IPR001005 -
Mupr18373g00001 269 CDD SANT 15 76 IPR001005 -
Mupr18373g00001 269 ProSiteProfiles Myb-like domain profile. 77 150 IPR001005 -
Mupr18373g00001 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 154 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18373g00001 Mupr-Chr18373 2030 3391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18373g00001 2 241 MYB Transcription Factor Family AT4G38620 44.269 2.02e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr18373g00001 Myb_DNA-binding 6.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18373g00001 K09422 - egr:104433192 273.863