Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18367g00002 ATGGACGACCAATTTGGGGAGGTTACCAAAGTTCACAATAGAAGCATCACCCATTTATTAGTTCGTTCAAGTCCAACAGTGTATGAAAACGGTGATGAAGCTAAACCTGTGATTCTCCCCACTCCAAGATCTGAAGGGGACATACTTTCATCCCCACATTTAAAAGCCTTCACATTAGAGGATCTTAAGAAGGCCACTAGAAATTTCCGCCCTGATTTTCTAATTGGAGAAGGGGGATTTGGTTATGTCTATAAGGGGTGGATTAGTGATGGTAAAGCCTTTGGGGCTACAAAGCCTGGATCTGGAATGGCTGTAGCTGTAAAGAAGCTTAAGCCTGAAGGTTTTCAAGGACATAAGGAGTGGCTGTCTGAACTCAATTATCTTGGCCAACTTCGTCATCCAAATCTTGTCAAACTTATTGGATACTGCGTAGTAGGAGATAATCGACTTCTAGTGTACGAGTACTTGCCCAACAGATGCTTGGAAAATCATCTATTTCGCAAGGGCATAAAACCACTTCCTTGGGCAACAAGAATCAAGGTTGCTATTGGCGCTGCTCGAGGTCTCTCCTTCCTACATGATTCTAAGCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGACTCGGAATTTAATGCAAAACTTTCGGACTTTGGATTGGCCAAAGCAGGGCCCACCGGTGATCATTCTCATGTTTCCACTCAAGTCCTGGGCACTCACGGCTATGCTGCTCCTGAATATATTGCCACAGGTCGGCTGACTTCAAAGTGTGATGTCTATAGCTTTGGGGTTGTGCTATTGGAACTACTATCAGGGCGCCATGCTGTTGATAACACAAAATCTGGGGTGGAACATAATCTAGTAGAATGGGCAAGACCCTATTTGGGCGATAGGAGGAAGTTGTTCCGGATTATGGACACCAAGTTAGAAGGGCAATACCCACAAAGGGCAGCTTATACAGCTGCAATTATTGCCTTACAATGCATTAGTGAGGCCAAGATTAGACCACAGATGTCTGAGGTTTTGGCCGCCTTGGAACACCTGCCAGTCATTAGGCATTCAGCTAGCCCATGTAGAGAAGACAAGTCTATGTCAAGTCCCATGAGAGAGGGTCCAAGTCCT 1134 0.4444 MDDQFGEVTKVHNRSITHLLVRSSPTVYENGDEAKPVILPTPRSEGDILSSPHLKAFTLEDLKKATRNFRPDFLIGEGGFGYVYKGWISDGKAFGATKPGSGMAVAVKKLKPEGFQGHKEWLSELNYLGQLRHPNLVKLIGYCVVGDNRLLVYEYLPNRCLENHLFRKGIKPLPWATRIKVAIGAARGLSFLHDSKQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDHSHVSTQVLGTHGYAAPEYIATGRLTSKCDVYSFGVVLLELLSGRHAVDNTKSGVEHNLVEWARPYLGDRRKLFRIMDTKLEGQYPQRAAYTAAIIALQCISEAKIRPQMSEVLAALEHLPVIRHSASPCREDKSMSSPMREGPSP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18367g00002 378 FunFam Serine/threonine-protein kinase BIK1 39 155 - -
Mupr18367g00002 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mupr18367g00002 378 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Mupr18367g00002 378 ProSitePatterns Protein kinases ATP-binding region signature. 75 108 IPR017441 GO:0005524
Mupr18367g00002 378 PANTHER OS01G0588500 PROTEIN-RELATED 46 352 - -
Mupr18367g00002 378 Gene3D Transferase(Phosphotransferase) domain 1 156 367 - -
Mupr18367g00002 378 SUPERFAMILY Protein kinase-like (PK-like) 47 350 IPR011009 -
Mupr18367g00002 378 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18367g00002 378 FunFam Serine/threonine-protein kinase PBS1 156 367 - -
Mupr18367g00002 378 CDD STKc_IRAK 75 352 - -
Mupr18367g00002 378 Pfam Protein tyrosine and serine/threonine kinase 75 296 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18367g00002 Mupr-Chr18367 2393 5484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18367g00002 55 376 Glycoside Hydrolase AT3G07070 50.000 3.41e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr18367g00002 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18367g00002 - - gmx:100791844 628.246