Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18350g00002 ATGCAAGACCAGGCTTTTGCCCAAATTTATTGTTTCTTCCTTATCCGCAATTGTGTTTCTTCCATCAGTTGCACAGGAGTAACAACGGTACCCGAATTATCTCCCAAGGAAAGTAGTGCTCTAGAGAATCCAATTCCAGACGGAGAACAGGCTGTAAAATCCAATGACAGAATTGGATTCTCTGCTGTCAGAAAGAGAATGCAACAAAAATCTCTACCGTTAACACTTTTTTCATACATTAAGAAGTTAATAAAGTATAAGCTTGAAGATAGTTCGCCATACCAGTGGTTGAGGGAGCTGAGATGGGATTCCCGGGAGGGCTTAAATCCAATAAGCCTTCTTATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATCAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATCTCATCTCCTGATGGTAATGCAGTGCAAAGGATGGTCACTTATTTCAGTGAAGCACTTGGTTACAGGATAATCAAACACTTGCCAGGTGTATACAAGTCTCTCAATCCCTCAAAAACATCACTGTCTTCAGAAGATATCCTTGTTCAGAAATACTTCTATGAACTGTGTCCCTTTTTGAAGTTCTCATACCTGATCACAAACCAAGCCATTGTTGAGGCCATGGAATGTGAACAAGTGGTTCACATCATTGATCTCCACTGTTGTGAGCCAGCTCAATGGAAAGATCTTCTGCTAACTTTTAAAAACCGCCAGGGAGGTCCACCGCATCTGAAAATTACAGGAATTCATGATAAGAAAGAAGTCTTAGAGCAAATGAACTTTCATTTGACAACTGAAGCTGGAAATTTGGATTTTCCTTTACAGTTCTATCCAGTTGTCAGCAAACTGGAAGATGTTGACTTTGAAAAGTTGCCTGTGAAGACAGGAGATGCTATTGCAATCACTTCTGTTCTTCAGATGCATTCTCTTCTTGCCACTGATGATGACATGGCTGGGAGGATCTCACCCGCCGCCGCAGCATCCATGAATCTGCAAAGAGCAGTGCATTTGGGCCAAAGGACTTTTGCAGAGTGGCTTGAGAGAGACATGGTCAATGCATACATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTTGGTGCCTCGCCTAAGATGGGGATCTTTCTTAAAGCTATGCGGAAACTCAAGCCAAAACTGGTGGTGATTACTGAACAAGAATCAAATCTGAATGGATCCAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTACAGTGCATTGTTTGACTGCTTGGACTCTACTGTTATGAGAACATCAGTGGAGAGGCAAAAACTTGAGAGCATGCTTCTCGGAGAGCAGATAAAGAACATCATTGCTTGTGAGGGAGTTGATAGAAAGGAAAGGCACGAAAAACTCGAGAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTGAAGGTGCCTTTGAGCTACAATGGGAGGATAGAGGCAAAGAATCTGCTGCAGAGATATAGCAATAAATACAAATTTCGAGAAGAGAATGATTGTTTGCTT 1536 0.418 MQDQAFAQIYCFFLIRNCVSSISCTGVTTVPELSPKESSALENPIPDGEQAVKSNDRIGFSAVRKRMQQKSLPLTLFSYIKKLIKYKLEDSSPYQWLRELRWDSREGLNPISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVQRMVTYFSEALGYRIIKHLPGVYKSLNPSKTSLSSEDILVQKYFYELCPFLKFSYLITNQAIVEAMECEQVVHIIDLHCCEPAQWKDLLLTFKNRQGGPPHLKITGIHDKKEVLEQMNFHLTTEAGNLDFPLQFYPVVSKLEDVDFEKLPVKTGDAIAITSVLQMHSLLATDDDMAGRISPAAAASMNLQRAVHLGQRTFAEWLERDMVNAYILSPDSALSPLSFGASPKMGIFLKAMRKLKPKLVVITEQESNLNGSNLMERVDRALYFYSALFDCLDSTVMRTSVERQKLESMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSNKYKFREENDCLL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18350g00002 512 Pfam GRAS domain family 111 511 IPR005202 -
Mupr18350g00002 512 ProSiteProfiles GRAS family profile. 101 512 IPR005202 -
Mupr18350g00002 512 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 500 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18350g00002 Mupr-Chr18350 3003 7741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18350g00002 71 510 GRAS Transcription Factor Family AT1G50420 48.884 6.50e-140 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr18350g00002 GRAS 5.3e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18350g00002 - - gmx:106798410 788.875