Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18342g00001 ATGTTGTCCCCAATTATGAGTCAGTCACCAACATATATATATATGGTTTTACCAGCTACTCCACTTTGGCGCAATGGACCAGAAGACAAGCCAGTGTTGTGCAATGCATGTGGATCAAGATACAGGAAATGGGGAAACCTTGAGAACTATCTTCCCAACCATTTTCAAGCAGAGTATCTTGATAACCTTAACAGTCTTGAGGGTAGAAGCAATCTCTTTGTTTCAAGCTATGTTACAGGTGGGAAAAATGCACGTTTATGGTGTCCTATGATCCCTTCAAGGAAACGTTCACGGGTGATGTACAAGAAGATAACACCAATGAAGAGGTTTCAAAAACAACTTCTCAAGATGTGGAAAAATTACGAGAACCTAGATGAGTCATCCCCTGAAGAGGTCTTATTGTTCAACAACGTAAATAACTTCATACCTAGTAATGAAATAGGCCTTGGAGGTGTTCTTCTTAAACCCGATTATACTTGTGCATAG 486 0.3992 MLSPIMSQSPTYIYMVLPATPLWRNGPEDKPVLCNACGSRYRKWGNLENYLPNHFQAEYLDNLNSLEGRSNLFVSSYVTGGKNARLWCPMIPSRKRSRVMYKKITPMKRFQKQLLKMWKNYENLDESSPEEVLLFNNVNNFIPSNEIGLGGVLLKPDYTCA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18342g00001 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 50 - -
Mupr18342g00001 161 Pfam GATA zinc finger 20 45 IPR000679 GO:0006355|GO:0043565
Mupr18342g00001 161 Gene3D - 18 120 IPR013088 GO:0006355|GO:0008270
Mupr18342g00001 161 PANTHER OSJNBB0038F03.10 PROTEIN 20 60 IPR044589 -
Mupr18342g00001 161 CDD ZnF_GATA 20 45 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18342g00001 Mupr-Chr18342 1753 2333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18342g00001 8 58 C2C2-Gata Transcription Factor Family AT5G47140 60.784 2.10e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr18342g00001 GATA 9.9e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18342g00001 - - gmx:102667887 171.4