Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18340g00001 ATGGAGGGGACCAACCACAACACGTTTAGCTTCATCGCTAACACGATTGAGCCCCCAAGTCCAAGCACCCCTGGGCCATCATCATCCCCTGGTTCTCTTGCAAGAATTGCACAAAGTTACCCCCCTGGCTTTTCCAGAAAGGTATTTGCGGAGGTTATAGGGACATTTTTATTGGTGTTTGTGGGAAGTGGTTCTGCTGGTCTTAGTGCTATTGATGAAAGCAAGGTCTCAAAACTTGCAGCTTCACTTGCAGCAGGATTCATAGTGACGGTCATGATTTATTCAATTGGACACATCTCTGGAGCACACATGAACCCAGCGGTTTCGCTTGCTTTTGCGGCGGTCAGGCATTTTCCGTGGCCACAGCTCCCATTTTACGTAGCAGCTCAACTCACTGGAGCCATATCTGCTTCATATACATTGCGAGAGCTGTTACAACCATCAAAGGAGATTGGGGCAACGTCACCTGCTGGATCACATATTCAAGCACTAATCATGGAAATGGTGACCACTTTCACCATGGTGTTCATTTCCATGGCCGTGGCCACTGACACAAACGCTACAGGACAGCTGTCAGGAGTAGCAGTAGGTTCTTCTGTTATGATAGCAAGCATTGTTGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAACTTCATCCTACAATGGACTTTGGGTATATTTTGTTGGACCGATTACTGGGGCACTTTTAGCAGCATGGTCTTACAATGTGATCAGGGACACAGACCACCCTGGTTTTCCTTTTTCACTATCCTCCCTTTCATTCAAGGTGCGCCAAACCACCACTGGAACTGACCAAGTTGCTAAAAACAGCCACCACGCATGCTTGGTGTGA 882 0.4785 MEGTNHNTFSFIANTIEPPSPSTPGPSSSPGSLARIAQSYPPGFSRKVFAEVIGTFLLVFVGSGSAGLSAIDESKVSKLAASLAAGFIVTVMIYSIGHISGAHMNPAVSLAFAAVRHFPWPQLPFYVAAQLTGAISASYTLRELLQPSKEIGATSPAGSHIQALIMEMVTTFTMVFISMAVATDTNATGQLSGVAVGSSVMIASIVAGPISGGSMNPARTLGPAIATSSYNGLWVYFVGPITGALLAAWSYNVIRDTDHPGFPFSLSSLSFKVRQTTTGTDQVAKNSHHACLV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 Pfam Major intrinsic protein 44 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mupr18340g00001 293 MobiDBLite consensus disorder prediction 12 32 - -
Mupr18340g00001 293 SUPERFAMILY Aquaporin-like 40 260 IPR023271 -
Mupr18340g00001 293 Gene3D Glycerol uptake facilitator protein. 28 260 IPR023271 -
Mupr18340g00001 293 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Mupr18340g00001 293 PANTHER AQUAPORIN NIP2-1 38 265 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18340g00001 Mupr-Chr18340 1004 5075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18340g00001 45 260 Major Intrinsic Protein MIP AT5G37820 47.005 7.86e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18340g00001 K09874 - gmx:100795261 442.965