Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18337g00001 ATGACTGTGGATGAAGTGGATAGTAGCTCCGAGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCGTTGGCAACTCATCCGGAGGATGCCTCTGATCGATGGGAGAAGATTGCAGCTGATGTGCCGGGGAAGACTATAGAAGAAATCAAACAGCATTATGAGCTCTTGGTTGACGATATTAACCAGATTGAATCTGGTTGCGTGCCTCTACCATCTTATAATTCTTCTTCAGAGGGCTCAACGAGCCATGCTAGTGATGAAGGAGCTGGCAAGAAGGGTGGCGGTCTTGGGAATTATAACAGCGAGTCTAATCATGGAAGTAAGGCTTCAAGATCGGATCAGGAACGGCGAAAGGGTATTGCTTGGACAGAGGATGAACACAGGCAATACGGAAAAGGTGACTGGCGAAGCATATCAAGGAACTTTGTGGTGACAAGAACTCCTACACAAGTAGCAAGCCATGCCCAGAAATACTTCATTCGTTTGAACTCGATGAACAAAGATAGAAGGCGATCCAGCATACATGACATTACTAGTGTTAACAATGGAGACATTTCAGCACCTCAAGGACCAATTACCGGTCAAACGAATGGTTCTGCCGGAAATTCTACCACCAAAGCAGCCAAACAAGCCACTCCAGCCTCAACAGGTGTACCAAGTGTTGGAATGTATGCCGCTCCAACCATTGGACAACCTATAGGAGGACCCTTGGTATCTGCTGTAGGCACCCCAGTGAACCTTCCTGGTCCTCCACACATGGCATATGGTGTCCGAGCCCCGGTTTCCGGTGCAGTGGTACCTGGTGCACCGGTGAACATGGGTCCTGTGACTTACCCTATGCCACATACAGCTGCTCCTCAC 864 0.4861 MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVDDINQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGGGLGNYNSESNHGSKASRSDQERRKGIAWTEDEHRQYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSAGNSTTKAAKQATPASTGVPSVGMYAAPTIGQPIGGPLVSAVGTPVNLPGPPHMAYGVRAPVSGAVVPGAPVNMGPVTYPMPHTAAPH 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18337g00001 288 NCBIfam myb-like DNA-binding domain, SHAQKYF class 119 162 IPR006447 GO:0003677
Mupr18337g00001 288 SMART sant 119 162 IPR001005 -
Mupr18337g00001 288 SMART sant 8 60 IPR001005 -
Mupr18337g00001 288 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Mupr18337g00001 288 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Mupr18337g00001 288 CDD SANT 11 58 IPR001005 -
Mupr18337g00001 288 CDD SANT 122 160 IPR001005 -
Mupr18337g00001 288 Gene3D - 122 166 - -
Mupr18337g00001 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 164 IPR017930 -
Mupr18337g00001 288 Gene3D - 5 71 - -
Mupr18337g00001 288 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Mupr18337g00001 288 Pfam Myb-like DNA-binding domain 126 160 IPR001005 -
Mupr18337g00001 288 FunFam Transcription factor SRM1 4 71 - -
Mupr18337g00001 288 PANTHER TRANSCRIPTION FACTOR KUA1 8 283 - -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 179 217 - -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 8 35 - -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 68 85 - -
Mupr18337g00001 288 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 68 131 - -
Mupr18337g00001 288 SUPERFAMILY Homeodomain-like 117 165 IPR009057 -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 1 35 - -
Mupr18337g00001 288 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18337g00001 Mupr-Chr18337 3185 12001 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr18337g00001 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18337g00001 - - ccaj:109792793 538.88