Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18322g00001 ATGGAAAACGATGAAGAATGCATCACTGGGCTATATCTGGGACTGGGAATGGGAGGGCATGTTCCAAAAAAGGATAAGCAGAAAGAGAACAAGCCCGTGGCGTGCTTTGACCTAGCGTTTGAGCTTTGTCCAAAAGGGGAAGCCATTAACGTGAATCATAATAAGGTCGACAGATTCAGTTTGGAAGGAATCCACGAGGGATACGAGTACGCTAATGAAAAGAGCACCGATTCTGATAACAGCAACCACAACCACAACGGATGCAGAAAGAAACTGAGGCTTTCCAAGGAGCAATCAGCCATGCTTGAGAACAGCTTCAAACTACATAGCACTCTCAATCCGGTTCAGAAACAAGAACTTGCTGATCAATTGAATTTAAAAACCAGACAAGTTGAAGTTTGGTTTCAGAACCGAAGAGCAAGGACGAAGCTGAAGCAGACAGAAGTGGACCGCGAGTTGTTGAAAAAACACTGTCAAAATCTAAGTGATGAGAACAGAAGATTGAAGAGGGAATTGCAGGAACTACGTGCACTTAAGGTTGGAACGTCGCCACTGTGCATTCAACTAGCCAAAACGACGAGTCTGATTATGTGTTCTTCGTGCGAGAAACTAGTAAAGCTCAATGAAGGAAATTAA 636 0.4371 MENDEECITGLYLGLGMGGHVPKKDKQKENKPVACFDLAFELCPKGEAINVNHNKVDRFSLEGIHEGYEYANEKSTDSDNSNHNHNGCRKKLRLSKEQSAMLENSFKLHSTLNPVQKQELADQLNLKTRQVEVWFQNRRARTKLKQTEVDRELLKKHCQNLSDENRRLKRELQELRALKVGTSPLCIQLAKTTSLIMCSSCEKLVKLNEGN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18322g00001 211 Coils Coil 144 178 - -
Mupr18322g00001 211 Gene3D - 93 143 - -
Mupr18322g00001 211 SUPERFAMILY Homeodomain-like 74 146 IPR009057 -
Mupr18322g00001 211 SMART halz 145 188 IPR003106 GO:0006355|GO:0043565
Mupr18322g00001 211 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 204 - -
Mupr18322g00001 211 CDD homeodomain 89 146 IPR001356 GO:0003677
Mupr18322g00001 211 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Mupr18322g00001 211 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Mupr18322g00001 211 SMART HOX_1 87 149 IPR001356 GO:0003677
Mupr18322g00001 211 Pfam Homeodomain 89 143 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18322g00001 Mupr-Chr18322 2219 3463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18322g00001 75 203 Homeobox Transcription Factor Family AT3G60390 64.615 2.40e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mupr18322g00001 Homeodomain 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18322g00001 K09338 - gmx:100812222 320.857