Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18310g00001 ATGGAGAGAGAGAGCTTGAGAATTACTATTAACATGTCATTCTTTCATATGGTTGAGAGTTTAGAGTCCCCAGAATTTATCCCTTTCAAAGAACCAAACTTGGAGACACTGGTCGAGAGCTGCGTCACACATGACCTACCCCAAAGCAACGAACTTGAAGATTGTAGGCATAGAGAGTCTAAAACAAGTACAAGGAAACGGAGAAAGAGAAAAACCAAGAACAAGGAAGACGCTGAGAAGCGGCGCATGACTCACATTGAAATGGAACGCAACAGGCGACGCCAAATCACTCATCATCTCGCTGTGCTCAAATCCCTCATGCCCTCTTCCTATGTTCAAAGGGGTGACCATGCATCAATAATTGGAGGAGCAATAGATTTTGTGAAGGAATTAGAGCAGTTAGTTCAATCCATGGAGGCACAAAAGAGAGTGAGGAACAAAGAAGAGGTTGGCTCCAGCGAGTTGTTTGAACATGATTATGAAGAAGTAAAGTGTGAGGGTGAGGTTAAGGCAGAGAAGAACTCAGAGGCAGTAGCTGTAGATGTAACTGTGATTCAAACCCATGTGAACTTGAAAATTCAGTGCTTAAGGAGACCTGGGCAATTGATTAAAGCTATCGTTGCCTTGGAGGACCTTAGGCTAACTGTTTTGCATCTCAACATCACATCCTCAGATGCTACAGTTCTCTACTCTTTCAATCTCAAGTCAAATCTTCTAAGTGGAATTAAGTCACTGTACTTTTCTGATGCTGTATTATTATTGCATCACCGTTAG 774 0.4238 MERESLRITINMSFFHMVESLESPEFIPFKEPNLETLVESCVTHDLPQSNELEDCRHRESKTSTRKRRKRKTKNKEDAEKRRMTHIEMERNRRRQITHHLAVLKSLMPSSYVQRGDHASIIGGAIDFVKELEQLVQSMEAQKRVRNKEEVGSSELFEHDYEEVKCEGEVKAEKNSEAVAVDVTVIQTHVNLKIQCLRRPGQLIKAIVALEDLRLTVLHLNITSSDATVLYSFNLKSNLLSGIKSLYFSDAVLLLHHR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18310g00001 257 MobiDBLite consensus disorder prediction 55 81 - -
Mupr18310g00001 257 SMART finulus 86 137 IPR011598 GO:0046983
Mupr18310g00001 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 80 131 IPR011598 GO:0046983
Mupr18310g00001 257 MobiDBLite consensus disorder prediction 61 75 - -
Mupr18310g00001 257 Coils Coil 61 81 - -
Mupr18310g00001 257 PANTHER MAX DIMERIZATION, MAD 51 236 - -
Mupr18310g00001 257 Coils Coil 128 148 - -
Mupr18310g00001 257 Pfam Helix-loop-helix DNA-binding domain 81 132 IPR011598 GO:0046983
Mupr18310g00001 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 146 IPR036638 GO:0046983
Mupr18310g00001 257 Gene3D - 76 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18310g00001 Mupr-Chr18310 2724 4212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18310g00001 29 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 46.725 2.77e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr18310g00001 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18310g00001 - - aprc:113862094 266.544