Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18306g00001 ATGGTTTTCTTAGAAACCTTGTTGTTGTTTCTTTTACTTGTACCATTTGGTGACTCGTTTGCAAGGCGGCACCCTTCTCATTGTTTAGCGACAGATAAAGCTGCTCTACTGGAATTCAGAAAAACAATAACATCAGACCCGCATTCCTCCCTTGCCAACTGGGATGAAACTGTTGATGTGTGCAACTTCACGGGTGTTGAATGTGATGAATTCCACAATCGTGTTACACGAATAATGCTATACGATAAAGCTCTAGTGGGCCTGCTTTCACCAGTTCTTTCCAATCTGACTGGATTGCATGGCCTTGAGATTGTTGGAAGCCACTTATTCGGCGTTATTCCACCTGAATTCTCCAACCTGAGACGCCTTCACCGTATGATTCTGGAGGGTAATACTTTGCATGGGTCAATACCAGAGTCATTTTCCCAGCTTTCAAAGCTTAACATTCTAGTCATTAAGGAAAACAACATATCAGGCTCACTTCCTCCATCTCTCTTTTCCAACTTCTCTCAGTTAGACATTCTGGACTTGTCCAGCAACTCATTAAGTGGTCAAATCCCACAACAGATTGGAAACTGCCCTGGCCTCTGGAGTATCAGTTTATACGATAATCTTTTAACTGGAGACCTTCCTCTCTCCTTCACCAATCTATCTCTTCAAAATTTAGACTTGGAGTATAATTATCTGTCCGGTGAATTGCCTACAAATTTTGTAAGCAGTTGGCCTAATCTCCTTTACCTTCATTTATCATACAACAACATGGTAAGCCATCATAACAACACCAATCTTGATCCATTTTTCACTGCTCTCAGAAACAACAGTAATCTACAGGAGCTTGAATTGGCAGGCATGGGCCTTGGTGGAAGCTTCACCTATACTGTTGCCACCCAACTCACCACTCTAAAAACCCTCCTCCTGCAGGAGAACCACATTTTTGGATCAATTCCTCGCGGGTTAGCAAACCTTTCAAGGCTTTTCATTCTGAATTTAACATCCAATCTTCTCAATGGAACACTATCCTCTGACATCTTCACATTACCAAACTTGGAACAACTTTCCTTATCACACAACCTTTTCAAAACTTCAATTCCAGAATCAATAGGCAAGTGTCTCAATCTGGGTCTACTTGATCTGTCACACAATCAATTCTCAGGTAGGATTCCAGACAATTTGGGAAATTTGGTTAGACTAAATTCTTTGTTTCTCAACAACAACCTTCTCTCAGGAACAATACCTCCCACATTGGGACGGAGCACTAATCTGTACAGGCTTGACTTGTCCCATAATAGATTAACAGGAAGCATCCCACTGGAACTGGCAAGCTTGCATGAGATCAGAATTTTCATAAATGTCTCTCATAACCACCTTGAAGGTCCCCTGCCAATTGAGCTCAGCAAAATGGAAAAGGTTCAGGAGATAGATCTTTCCTCCAATCACCTAACTGGAAGTATCTTCCCTCAGATAGCAGGATGCATTGCTGTTTCAATGATTAATTTTTCAAACAATTTTCTTCAAGGTGAGCTCCCACAGTCCCTAGGTGATCTGAAAAACCTCGAAGCTTTTGATGTTTCAAGAAACCATTTGTCTGGATTCATACCAGCAACACTTAGTAAAATTGACACACTCACTTTTCTCAATCTATCGTTTAACAATCTGGAAGGAAAGGTTCCATCAGGCGGGATCTTCAATTCAGTTTCAAACTTGTCTTTCTTAGGAAATCCACAACTTTGTGGGACAATTGCAGGCATACCCTCGTGCTCTCAAAGTGGAAAATGGCTTCACACTCGTTCGTTATTGATTATATTCATTTTGGTCATCTTCATATCAACATTGTTGTCAATAATTTGCTGTGTAATTGGATGCAAGCGTCTTAAAGTAATCATCTGCTCTCCGAGAACTGAAGCAAGCAAAGTAGCAGCAAGACTTGAGTTAACAAGTAACTTCCCAAGAATCACATACAAGGAACTGTCAGATGCCACTGGAGGATTTGACGATCAAAGACTTGTTGGATCAGGCAGTTACGGACATGTCTATAGGGGTGTTCTCACGGATGGAACACCAATAGCAGTCAAGGTGCTGCATGTGCAATCTGGAAATTCTACCAAGAGCTTTAACAGAGAATGCCAAGTTTTGAAGAGAATTAGACACAGAAATATGATAAGGATTATCACAGCATGTAGCCTACCTGATTTTAAGGCTCTTGTTCTACCTTATATGGCCAATGGGAGCTTGGAGAGCTGCCTCTATCCTTCTTGTGGAACATCAAACTTGAGTACTGTCCAGAGGGTGAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCATCATTCTCCTGTCAGAGTCATACACTGTGATCTAAAGCCAAGCAATGTTCTTCTCAATGATGACATGACAGCTCTCGTTTCTGATTTTGGAGTTGCAAGGCTAATCATGAGTGCTGGAGGTGGGGCTATTGATAACATGGGCAACTCAAGTGCAAATTTCTTCTGTGGATCCATTGGATACATTGCACCAGTTCAAATAAGAAGTCATCAGAACTCTTCCACACTTCCTCATGCAGAATATGGATTTGGATCCAATACATCTACCAAAGGAGATGTGTATAGCTTTGGCATTCTAGTTCTGGAGATGGTGACTAGAAGAAGGCCTACAGATGACATGTTTGTTGGTGGGTTTAGTCTGCACAAATGGGTAAAGATTCACTTTCACGGAAGGGTAGAAAAAGTGGTAGATCCTGCTTTGGTGACAGCCTCAAGAGATCAATCCCAAGAGGTTAGAAAGATGTGGGAAGTTGCTATTGCGGAGTTAATTGAGTTGGGGCTTCTTTGCACACAGGACTCACCTTCGACAAGACCAACCATGCTTGATGCAGCAGATGATTTAGATCGTCTCAAGAGATACCTTAATGGGGACACAACAGGAACTTTTGCCTCATCTCTTGGAATTTCATCTTCCACTATAGGTGGTGAC 2979 0.4173 MVFLETLLLFLLLVPFGDSFARRHPSHCLATDKAALLEFRKTITSDPHSSLANWDETVDVCNFTGVECDEFHNRVTRIMLYDKALVGLLSPVLSNLTGLHGLEIVGSHLFGVIPPEFSNLRRLHRMILEGNTLHGSIPESFSQLSKLNILVIKENNISGSLPPSLFSNFSQLDILDLSSNSLSGQIPQQIGNCPGLWSISLYDNLLTGDLPLSFTNLSLQNLDLEYNYLSGELPTNFVSSWPNLLYLHLSYNNMVSHHNNTNLDPFFTALRNNSNLQELELAGMGLGGSFTYTVATQLTTLKTLLLQENHIFGSIPRGLANLSRLFILNLTSNLLNGTLSSDIFTLPNLEQLSLSHNLFKTSIPESIGKCLNLGLLDLSHNQFSGRIPDNLGNLVRLNSLFLNNNLLSGTIPPTLGRSTNLYRLDLSHNRLTGSIPLELASLHEIRIFINVSHNHLEGPLPIELSKMEKVQEIDLSSNHLTGSIFPQIAGCIAVSMINFSNNFLQGELPQSLGDLKNLEAFDVSRNHLSGFIPATLSKIDTLTFLNLSFNNLEGKVPSGGIFNSVSNLSFLGNPQLCGTIAGIPSCSQSGKWLHTRSLLIIFILVIFISTLLSIICCVIGCKRLKVIICSPRTEASKVAARLELTSNFPRITYKELSDATGGFDDQRLVGSGSYGHVYRGVLTDGTPIAVKVLHVQSGNSTKSFNRECQVLKRIRHRNMIRIITACSLPDFKALVLPYMANGSLESCLYPSCGTSNLSTVQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLNDDMTALVSDFGVARLIMSAGGGAIDNMGNSSANFFCGSIGYIAPVQIRSHQNSSTLPHAEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFVGGFSLHKWVKIHFHGRVEKVVDPALVTASRDQSQEVRKMWEVAIAELIELGLLCTQDSPSTRPTMLDAADDLDRLKRYLNGDTTGTFASSLGISSSTIGGD 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18306g00001 993 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Mupr18306g00001 993 SMART serkin_6 663 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18306g00001 993 FunFam Leucine-rich repeat receptor-like protein kinase 29 188 - -
Mupr18306g00001 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Mupr18306g00001 993 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Mupr18306g00001 993 Gene3D Ribonuclease Inhibitor 218 592 IPR032675 -
Mupr18306g00001 993 ProSiteProfiles Leucine-rich repeat profile. 420 443 IPR001611 GO:0005515
Mupr18306g00001 993 SUPERFAMILY L domain-like 320 578 - -
Mupr18306g00001 993 ProSitePatterns Protein kinases ATP-binding region signature. 669 691 IPR017441 GO:0005524
Mupr18306g00001 993 Pfam Leucine rich repeat 121 182 IPR001611 GO:0005515
Mupr18306g00001 993 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 167 965 - -
Mupr18306g00001 993 Pfam Protein kinase domain 664 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18306g00001 993 ProSiteProfiles Protein kinase domain profile. 663 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18306g00001 993 SUPERFAMILY Protein kinase-like (PK-like) 643 964 IPR011009 -
Mupr18306g00001 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 739 976 - -
Mupr18306g00001 993 SUPERFAMILY RNI-like 80 408 - -
Mupr18306g00001 993 SMART LRR_typ_2 169 193 IPR003591 -
Mupr18306g00001 993 SMART LRR_typ_2 298 322 IPR003591 -
Mupr18306g00001 993 SMART LRR_typ_2 346 370 IPR003591 -
Mupr18306g00001 993 SMART LRR_typ_2 144 168 IPR003591 -
Mupr18306g00001 993 SMART LRR_typ_2 394 418 IPR003591 -
Mupr18306g00001 993 SMART LRR_typ_2 515 538 IPR003591 -
Mupr18306g00001 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 291 591 - -
Mupr18306g00001 993 Gene3D Transferase(Phosphotransferase) domain 1 739 978 - -
Mupr18306g00001 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 643 738 - -
Mupr18306g00001 993 Gene3D Phosphorylase Kinase; domain 1 643 738 - -
Mupr18306g00001 993 CDD STKc_IRAK 669 967 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18306g00001 Mupr-Chr18306 8697 11967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18306g00001 31 954 Receptor kinase-like Gene Family AT3G47570 34.615 3.38e-158 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mupr18306g00001 Pkinase 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18306g00001 - - gmx:100815766 1608.19