Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18295g00001 ATGGTTTTTACTTCCATACCAGCTGCTTATCTTGATGCAGCCAACTGGCAGCAACAGCAACCAAACCACCACCCCGGAGGCAGTGGTTCCACCTCTCAGCAGCTACTTCCACCGCCGCCGCCGCCGCCAGCATCAACGCAGCCTCATGGAGCCGGTTCGATCAGGCCAGGATCCATGACTGATAGGGCAAGGATGGCCAACTTGCCTATGCCAGAGGCTGCACTCAAGTGTCCACGCTGCGAATCCACCAACACCAAATTTTGCTACTTCAACAACTACAGTCTATCTCAGCCCCGCCATTTCTGCAAGACCTGCAGAAGGTACTGGACCAGAGGCGGCGCCCTCAGAAGTGTCCCTGTCGGTGGTGGCTGCCGGAGGAACAAGCGGAGCAAAGGAAGCAACGGCGGCTCCAAGTCTCCGGCGAGCTCTGACCGCCAGACGGGGAGTGCCAGTTCCACCAACTCGGTCTCTTCTAACAGTGCTGCTTCTGCTGCTGACATAATAGGCCTAGCACCCCAAATGCAACCACTCAGGTTCATGCCTCCATTGCATCAACTCACTGACTTTGAAGCTGGAGATATGGGCCTAAACTATGGCCTCAATTTTGGCCCAATTTCAGGTCCAATGGGAGGAGTAGGGGACTTGAGTTTCCAAATCGGAGGGAATGCTTTTGTTGGTGGTAGTTCAATCTTGTCTGCAGCTGGTTTGGAGCAATGGAGAATGCCACAACAATTTCCCCTCTTGGCTGCCTTCGAAGGTTCATCACCAGCTGCTAATTTATTCCCTTTTGAAGGCAGTGCTGAGGTAAGTGGATATGTGAGGCCAAAGGTTTCAACTTCTGGGGTCATATCTCAGCTGGCTTCGGTGAAAATGGAAGATAGTAGGGAACTTAACTTGTCAACCCAGTTCTTGGGAAGCAATAATCCAGTGAGTGAACAATATTGGACCAGTGCTACTTCTGCATCTTGGACAGATATTTCAGGCTTTGGCTCTTCTTCCACTACTAGCAACCAGCTATAG 1020 0.5186 MVFTSIPAAYLDAANWQQQQPNHHPGGSGSTSQQLLPPPPPPPASTQPHGAGSIRPGSMTDRARMANLPMPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGSNGGSKSPASSDRQTGSASSTNSVSSNSAASAADIIGLAPQMQPLRFMPPLHQLTDFEAGDMGLNYGLNFGPISGPMGGVGDLSFQIGGNAFVGGSSILSAAGLEQWRMPQQFPLLAAFEGSSPAANLFPFEGSAEVSGYVRPKVSTSGVISQLASVKMEDSRELNLSTQFLGSNNPVSEQYWTSATSASWTDISGFGSSSTTSNQL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18295g00001 339 MobiDBLite consensus disorder prediction 119 157 - -
Mupr18295g00001 339 Pfam Dof domain, zinc finger 74 129 IPR003851 GO:0003677|GO:0006355
Mupr18295g00001 339 MobiDBLite consensus disorder prediction 133 157 - -
Mupr18295g00001 339 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
Mupr18295g00001 339 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Mupr18295g00001 339 MobiDBLite consensus disorder prediction 18 59 - -
Mupr18295g00001 339 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 47 174 IPR045174 GO:0003700|GO:0006355
Mupr18295g00001 339 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18295g00001 Mupr-Chr18295 2260 3456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18295g00001 1 332 C2C2-Dof Transcription Factor Family AT2G37590 39.452 1.85e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr18295g00001 zf-Dof 5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18295g00001 - - rcu:8279572 379.022