Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18289g00001 ATGGCATCTCTTCACTCTTCTCTGCTCTTGCCATCGAATCTCCTTTCCCTCGCTACCCCATCAAGTTCCTCCACTCGCATTCTCTTGAACCCGACACCCTCCTTGCGACCCCTTCTCACCACACGACGCCGTTTTGGGAGACCCTTCGCGGTGGCTGAACAAGCCACTGTATCGGACGCCGCCAGGAGGCTCTACATTGGCAACATTCCCCGCACTGTCACCAACGATGAGCTTTCTAACATTGTTCAAGAACACGGTGCTGTTGAGAAAGCTGAGGTTATGTATGATAAATACTCTGGAAGGAGCCGTCGCTTTGCATTTGTTACGATGAAAACTGTTGAGGATGCTAATGCTGTGATTGAGAAACTTAACGGCACTGAAATTGGAGGGCGCGGGATCAAGGTAAACGTAACTGAAAAACCTTTATCAACACTAGATTCGCCTTTACTCCAAGCCGAGGAATCTGAATTTGTTGACAGTCCCCACAAAGTGTATGTGGGAAATCTGGCCAAGACAGTAACAACTGATACTCTTAAGAAGTTTTTTTCTGAGAAGGGAAAAGTTCTTAGTGCCAAGGTTTCACGGGTCCCTGGTACTTCAAAATCCAGTGGGTATGGTTTTGTTACTTTTTCATCAGAAGAGGATGTAGAAGCTGCAATCTCATCTTTCAACAATTCTAAAGTTATGTTTGGGAATGGGGTTTTGGAGAGAAAGGGAAGGGAAGAATTTGAGTTACCATCGGTTGCCTTCGATGCTAGCACCCTCACTAGTATGAGATTTCAAGCGACTAATCGAGGTTGTCAAGTTTTCGAAGTACACATTGCCCTCATGGGATCAACATGGGGCATTGGGATTTCCACACCGGATGTTACCCCCCCAAGGTCGGCTCCCAAGAAGGCATGGAGAAAGAGACACGATGAGATTCCCCTCCAGGAGTGGGAAAGAATATAA 951 0.4679 MASLHSSLLLPSNLLSLATPSSSSTRILLNPTPSLRPLLTTRRRFGRPFAVAEQATVSDAARRLYIGNIPRTVTNDELSNIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAVIEKLNGTEIGGRGIKVNVTEKPLSTLDSPLLQAEESEFVDSPHKVYVGNLAKTVTTDTLKKFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSKVMFGNGVLERKGREEFELPSVAFDASTLTSMRFQATNRGCQVFEVHIALMGSTWGIGISTPDVTPPRSAPKKAWRKRHDEIPLQEWERI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18289g00001 316 Gene3D - 146 233 IPR012677 -
Mupr18289g00001 316 FunFam 30S ribosomal protein 2, chloroplastic 149 238 - -
Mupr18289g00001 316 SUPERFAMILY RNA-binding domain, RBD 157 228 IPR035979 GO:0003676
Mupr18289g00001 316 CDD RRM1_PSRP2_like 63 142 - -
Mupr18289g00001 316 Gene3D - 50 144 IPR012677 -
Mupr18289g00001 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 64 133 IPR000504 GO:0003723
Mupr18289g00001 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 164 228 IPR000504 GO:0003723
Mupr18289g00001 316 SUPERFAMILY RNA-binding domain, RBD 54 140 IPR035979 GO:0003676
Mupr18289g00001 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 162 241 IPR000504 GO:0003723
Mupr18289g00001 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 62 140 IPR000504 GO:0003723
Mupr18289g00001 316 PANTHER OS02G0815200 PROTEIN 60 228 - -
Mupr18289g00001 316 SMART rrm1_1 63 136 IPR000504 GO:0003723
Mupr18289g00001 316 SMART rrm1_1 163 238 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18289g00001 Mupr-Chr18289 4579 8981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18289g00001 48 240 Eukaryotic Initiation Factors Gene Family AT1G22760 27.919 6.46e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18289g00001 K13126 - gmx:100783567 331.643