Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18283g00001 ATGAGTTTCCATGATACATCAAACACAGGGCTTGGACTTGGTCTCGGTCTTGGTCTTGTTAGCTTCAACGATCCATCAGAGAATTGCATAAAGAGTACTAATGATCCCTTGAGAGAAAGCCATAAGAAAAAGGTGGAGAATCCACCAAAATGCAACAAGACATACCCATCACTTACGCTAGGACCACCAGATGATGATGACGAAGTGAATAATCAACCAAGTTCAAAGACCGAGTCCTACGAATATTTTCGTCCCCAAGGTTCTTCTCCCAGCGCAGTGTCTTCATTTTCCAACTCTTCCAGCATCAAGAGGGAGCGAGATCAGGTCTTGGGAGAAGAATTTGAGGTAGAGGGAGAGAAACTTCCAACAAGGGTAGGTGATGTTGATGAAGATGATAACCCCAGAAAGAAACTTAGACTCACCAAAGAACAATCCTCAATCTTGGAGGAAAACTTCAGAGAGCATTCTACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAATGAAGCTGAATCTGCGAGCGAGACAAGTAGAGGTGTGGTTTCAGAATAGGAGAGCCAGAACAAAGCTAAAACAAATGGAGACAGATTGTGAACTATTAAAGAAGTGTTGCGACACTCTAACAGAAGAAAATAAGAGGCTGCAAAAGGAACTTCAAGAACTCAAGTCAATGCAAACAACGTCAGTGCCCCTTTATATGCAGATTCCAGCGGCCACACTTTCCATATGCCCTTCGTGTGAGAGAATTACCGGTGGTAACAACAACAGTGATAGCGGCAATGGTTCTTCACACACGACAACATTGCTTATTGGCTCAAAGACCCATCATCACTTTTACCAAAGTAACTATCCATTCTCCCATTCATCATCCGCAACATGT 879 0.4312 MSFHDTSNTGLGLGLGLGLVSFNDPSENCIKSTNDPLRESHKKKVENPPKCNKTYPSLTLGPPDDDDEVNNQPSSKTESYEYFRPQGSSPSAVSSFSNSSSIKRERDQVLGEEFEVEGEKLPTRVGDVDEDDNPRKKLRLTKEQSSILEENFREHSTLNPKQKQELAMKLNLRARQVEVWFQNRRARTKLKQMETDCELLKKCCDTLTEENKRLQKELQELKSMQTTSVPLYMQIPAATLSICPSCERITGGNNNSDSGNGSSHTTTLLIGSKTHHHFYQSNYPFSHSSSATC 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18283g00001 293 MobiDBLite consensus disorder prediction 31 110 - -
Mupr18283g00001 293 MobiDBLite consensus disorder prediction 73 104 - -
Mupr18283g00001 293 Coils Coil 190 227 - -
Mupr18283g00001 293 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 263 - -
Mupr18283g00001 293 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Mupr18283g00001 293 Gene3D - 128 197 - -
Mupr18283g00001 293 SMART HOX_1 133 195 IPR001356 GO:0003677
Mupr18283g00001 293 SMART halz 191 234 IPR003106 GO:0006355|GO:0043565
Mupr18283g00001 293 Pfam Homeodomain 135 189 IPR001356 GO:0003677
Mupr18283g00001 293 CDD homeodomain 134 192 IPR001356 GO:0003677
Mupr18283g00001 293 SUPERFAMILY Homeodomain-like 130 192 IPR009057 -
Mupr18283g00001 293 MobiDBLite consensus disorder prediction 34 49 - -
Mupr18283g00001 293 Pfam Homeobox associated leucine zipper 191 224 IPR003106 GO:0006355|GO:0043565
Mupr18283g00001 293 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18283g00001 Mupr-Chr18283 2642 4657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18283g00001 1 291 Homeobox Transcription Factor Family AT2G22800 48.026 8.18e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr18283g00001 Homeodomain 3.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18283g00001 K09338 - gmx:100807072 470.7