Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18274g00001 ATGGCAAATAAACACCATCCCTCAGTGTGTCTTGTGTTGGTTACTATTTTACTTTCTATCCATTACTCTGAGCAATTACAATCCTCTCAGTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAACTTTTCAGCTGCTTTAAGCAAGTGGAACAACCACACAGACTTTTGCAACACAGATTCAAACTCTTCCCTCACGGTAGTGTGCTATGAAGACACCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATTCACCTCTACCAAGAAGTTTCTCAATAGATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATGTGGGGTCCTTTGCCTGGTAAGATAGCTCGTTTATCATCCCTGGAAATAGTTAATATGAGTTCCAATTTTCTCTATGGTTCCCTTCCTCAGGAACTTTCATCACTGTCAAATCTCCAAACTCTCATTCTTGACAACAACATGTTGGCTGATACGATTCCTACTTGGTTTGATTCGCTTCCAGCCTTAACTGTGCTGAGTTTGAAGAAAAATATGTTCAATGGATCTCTACCGAATTCGCTCGGTAGCTTGGAGAATTTGAGAACTCTTTCACTTTCTCATAATCACTTTTATGGGGTGGTGCCTGATTTGAGCCGGTTGAAGAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCTCAGCTTGGTAACAAGTTGGTTACTCTAGTGCTAAGAAACAATAGGTTCAGGTCTGGTATTCCTGCTGAATTGAGCACATATTATCAGCTTGAACAATTGGATATTTCATCCAATGCATTTGTGGGGCCATTTCAGCCAGGATTGTTGGCACTTCCTTCTATTACTTATCTGAATATTTCTGGGAACAAATTAACTGGGATGCTTTTTGAGAATCTGTCTTGCAATTCGGAGCTTGATGTAGTTGATTTATCCTCAAACCTTTTGACTGGGGCCTTACCAAAATGTTTAGTGTCCAATTCCAGCGGTAGGACTTTCCTGTATGCTAGAAATTGTCTAGACTCTGCTAATCAAAATCAGCAGCCGCAGCCCTTTTGCCACACTGAAGCCTTGGCTGTGGGGATATTACCTGAGAGAAAGAAGCACAAACAAGTATCTAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTGTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCCAGAAGCAAAATGAAGAATCCTCCAACAAGATTTATAACAGAAAATGCTGCTTCTGGTTACACCTCTAAGTTGCTTTCTGACGCAAGGTATATATCTCAAACGAAGAAGTTGGGAGCAGTTGGCCTGCCAACTTATCGAAGTTTCTCACTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGTCAGCTGAAGAATGGCTCGCTTGTTGCTATTCGATGTGTACAAATGAAAAAGAGATACAGCACTCAGAAATTTGTGAACCACATAGAGCTGATATCAAAACTTAGGCATCGTCATCTAGTCAGCGCTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAACGTATTTCTTGTCTTTGAATACGTATCAAATGGCACACTCAGGAGTTGGATCTCTGATGAGCATGCTAGAAAATCCTTGAGTTGGACACAACGCATAGGAGCTGCAATTGGAGTGGCAAAAGGAATCCAGTTTTTGCATACAGGGATTGTTCCTGGTGTATATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCAAAAATCAGCAGTTATCACCTCCCTTTGTTATCTAACATGGGAAAGGGTCGGCATGGAAATTCTTCCAGTGGATTAAAAAATTCTAGCAATAATAAAAGTGTAAAGCATGAAGATAAGTCTGATATATACGACCTTGGAGTGATATTGCTCGAACTCATTCTAGCAAGGAAAATAAAGACAACGACTGATGCAGACGCATTTAGAGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAAGAGTATTGTTGATACAGCAATTCGCAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTGATTAAAGAGGCAGCAGATAGACCCTCTATAGAGGATGTTTTGTGGAACCTGCAGTTTGCATCTCAAGTACAGGATGCATGGAGAGGGGATTCTCAAAGTAGTGAAGGCTCACCAGGTTCAGAATCTCAAAGACTACCCTTCCATTAG 2346 0.4088 MANKHHPSVCLVLVTILLSIHYSEQLQSSQSQTLLRIQQLLNFSAALSKWNNHTDFCNTDSNSSLTVVCYEDTITQLHIIGERRDSPLPRSFSIDSFVTTLVRLPSLKVLTLVSLGMWGPLPGKIARLSSLEIVNMSSNFLYGSLPQELSSLSNLQTLILDNNMLADTIPTWFDSLPALTVLSLKKNMFNGSLPNSLGSLENLRTLSLSHNHFYGVVPDLSRLKNLQVLELDDNAFGPQFPQLGNKLVTLVLRNNRFRSGIPAELSTYYQLEQLDISSNAFVGPFQPGLLALPSITYLNISGNKLTGMLFENLSCNSELDVVDLSSNLLTGALPKCLVSNSSGRTFLYARNCLDSANQNQQPQPFCHTEALAVGILPERKKHKQVSKVVLSLGIVGGTLGGVALVLLIFFIVRRGNARSKMKNPPTRFITENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTASLMGEDSYGKMYRGQLKNGSLVAIRCVQMKKRYSTQKFVNHIELISKLRHRHLVSALGHCFECSLDDSSVSNVFLVFEYVSNGTLRSWISDEHARKSLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKGRHGNSSSGLKNSSNNKSVKHEDKSDIYDLGVILLELILARKIKTTTDADAFRDLLQASLGADEEGRKSIVDTAIRKACLDQSLKTMMEICVRCLIKEAADRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESQRLPFH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18274g00001 781 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Mupr18274g00001 781 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Mupr18274g00001 781 SUPERFAMILY Protein kinase-like (PK-like) 459 754 IPR011009 -
Mupr18274g00001 781 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Mupr18274g00001 781 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Mupr18274g00001 781 Pfam Protein tyrosine and serine/threonine kinase 481 747 IPR001245 GO:0004672|GO:0006468
Mupr18274g00001 781 MobiDBLite consensus disorder prediction 761 781 - -
Mupr18274g00001 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Mupr18274g00001 781 PANTHER UNNAMED PRODUCT 100 680 - -
Mupr18274g00001 781 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18274g00001 781 SMART LRR_typ_2 152 175 IPR003591 -
Mupr18274g00001 781 SMART LRR_typ_2 292 312 IPR003591 -
Mupr18274g00001 781 SMART LRR_typ_2 200 223 IPR003591 -
Mupr18274g00001 781 SMART LRR_typ_2 176 199 IPR003591 -
Mupr18274g00001 781 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
Mupr18274g00001 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 245 362 - -
Mupr18274g00001 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Mupr18274g00001 781 SUPERFAMILY L domain-like 34 353 - -
Mupr18274g00001 781 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Mupr18274g00001 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18274g00001 Mupr-Chr18274 2116 7536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18274g00001 43 779 Miscellaneous Gene Families AT3G03770 61.186 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mupr18274g00001 PK_Tyr_Ser-Thr 5.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18274g00001 - - gmx:100807539 1346.64