Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18254g00001 ATGGATGTGATGGTAAAAGGAGAAGTAAGTCATGGTGGTAATGGCTTTCAAATTTATGAGTGTGAAATTATAAACGCTAGCAACCCTCCTTTGACAATAGGCATAGATAGGTTCTTATGTGGACACTTCCCTCACCACCACCAACAACAACAAGCAAGGAACAATGATGCAAGTATTTTTGCTGAGGAGGCTTTCAAGTGGACAAACATCAACCAAACCGCTACATTGTGCCCCAAAGATATGCAAGTTTCAGGAAAGAATGCGAGAGTGGTCGGAAGGAGAAGCAAGAAACATTCTTCTGTGAGTTGGATCAAAGGACAGTGGAATAAAGAAGAGGACAGGAAACTGATAAGGTTGGTGAAGCAATATGGTGAAAGAAAATGGGCTGAAGTAGCTGAGAAGTTGGAGGGAAGGGTTGGCAAGCAGTGTCGAGAAAGATGGAATAATCATTTGCGTCCTGATATTAAGGTAGGCTTAGAATACTAA 486 0.4177 MDVMVKGEVSHGGNGFQIYECEIINASNPPLTIGIDRFLCGHFPHHHQQQQARNNDASIFAEEAFKWTNINQTATLCPKDMQVSGKNARVVGRRSKKHSSVSWIKGQWNKEEDRKLIRLVKQYGERKWAEVAEKLEGRVGKQCRERWNNHLRPDIKVGLEY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18254g00001 161 SMART sant 104 153 IPR001005 -
Mupr18254g00001 161 Pfam Myb-like DNA-binding domain 105 151 IPR001005 -
Mupr18254g00001 161 PANTHER MYB PROTEIN-RELATED 84 156 - -
Mupr18254g00001 161 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 155 IPR017930 -
Mupr18254g00001 161 CDD SANT 108 151 IPR001005 -
Mupr18254g00001 161 SUPERFAMILY Homeodomain-like 100 156 IPR009057 -
Mupr18254g00001 161 FunFam Transcriptional activator Myb isoform A 104 156 - -
Mupr18254g00001 161 ProSiteProfiles Myb-like domain profile. 105 151 IPR001005 -
Mupr18254g00001 161 Gene3D - 104 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18254g00001 Mupr-Chr18254 4869 5552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18254g00001 23 156 MYB Transcription Factor Family AT5G58850 43.421 6.30e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr18254g00001 Myb_DNA-binding 9.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18254g00001 K09422 - gmx:102668713 246.899