Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18222g00001 ATGAGTCTACACTCTAGTAATAGCAATAGTGGAGGTGGAGGTGGTAGCAGTAGTGTTGGTGGTGGTGGTAGCGGCATCATTGGTGGTAGTCCTTGCGGCGCTTGCAAGTTCTTGAGGAGGAAGTGTGTGCCGGGTTGTATCTTTGCTCCATACTTTGATTCAGAGCAAGGGACAAGTCACTTTGCAGCAGTGCACAAGGTGTTTGGGGCCAGTAATGTGTCCAAGCTCCTCCTTAGCATTCCGGTGCATAGGAGGCTTGATGCGGTCATCAGCATTTGCTATGAAGCACAGTCGAGGCTCAGAGATCCTGTTTATGGTTGTGTTGCTCACATCTTCGCCCTTCAACAACAGTCAATTAGTGAAAAGAGATATGTACCTCTCATTCCTTCCTTTGCATACATTGAAATAGTGGTTTTTTGCCCTAAGAGAGAGAGGAACAAAAGTGAGGATTGGGGAAAGAGGAAAATAAGGGTAGGGCTTGCGAAGCCATGGAACTAA 498 0.4719 MSLHSSNSNSGGGGGSSSVGGGGSGIIGGSPCGACKFLRRKCVPGCIFAPYFDSEQGTSHFAAVHKVFGASNVSKLLLSIPVHRRLDAVISICYEAQSRLRDPVYGCVAHIFALQQQSISEKRYVPLIPSFAYIEIVVFCPKRERNKSEDWGKRKIRVGLAKPWN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18222g00001 165 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Mupr18222g00001 165 PANTHER LOB DOMAIN CONTAINING PROTEIN 29 120 - -
Mupr18222g00001 165 Pfam Lateral organ boundaries (LOB) domain 31 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18222g00001 Mupr-Chr18222 2367 3425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18222g00001 34 125 AS2 family AT2G45420 81.522 1.28e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr18222g00001 LOB 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18222g00001 K21994 - gmx:100790517 185.652