Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18206g00001 ATGGTGCCAGACAACATGAAGAAGCAACTTGCTTTGGCTGTGAGAAGCATCAATTGGTGCTATGCAATTTTCTGGACTGATTCAACCACCCAACCAGGGGTGTTGAGCTGGGGGGAAGGGTATTACAATGGAGACATTAAGACAAGGAAAACAAGTCAAGGAGTAGAACTTAATTCTGACCAAATAGGGTTGCAGAGGAGTGAGCAGCTGAGAGAGCTATTCAAGTCCCTCAAAACTGCAGAAATCATCCCTCAAACCAAAAGGCCTTCAGCAGCACTGTCCCCAGAAGATCTCACAGATGCTGAGTGGTATTACTTGGTTTGCATGTCCTTCACATTCAACATTGGCCAAGGGTTACCAGGAAAAACTCTAGCCAAGGGTCAACCCATTTGGCTGAACAATGCCCACTCCGCCGATTGTAGAGTTTTTACTCGTTTTCTTCTGGCAAAGACGGTTGTGTGCTTTCCATTTATGGAAGGGGTTATTGAGCTAGGTATTACTGAACATGTCTCAGAAGATTTGAGTCTCATTGAGGGGATCAAAACTTCTTTCTTGAATAGTCTGCATGTCAATGTTCCTAATAAGTCAGGAGCTACATTGAAATCAAGGAACCAGGAAGATCTTGCTTATGTAGAATTTGATCATAATGCTTATAATGTTGAATCAGTTCCAGAAGTTGGGTATGACATAGCCAACACAACCTCTCCTAATAGTTGTTCAAATGCATTCCAAGCCAATCAACCACTAGAGGAAACATTAATGGTTGAAAGGATAACCAGTGGCACTTCTCAAGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGCAACTGTATCCATAACTCCATGAATTCCAGCGACTGCATATCACAAACTTTTGCCAGCCCTGACAATATTGCTTCTGCCCCCAAGTGTAACAACACTTCTGACCCTTGTGCTCGAGATCTTCAAAAGTGCAACAACCCAAAAATGACCTTAGTGGATCCTAAAAATGATGGTTGGCATTATCAGAGAGTTCTTTCTTCCCTTTTAAAAGGCTCTGACCAGTTACTTATGGGAATGCATTTCCAAAAATTTCATCAGGAATCAAGCTTTGTTAGTTGGAGGAAAGGAGGGCCAATGGATTACCAATGGCCAAGAGGAGGAAATTCACAAAAGTTATTGAAGAAAGTATTGTTTGAAGTTCCTCAAATGCACTCGGATGGGCTGCATGAGTCTCAAGAAGAGAATGACTATAAAGAGGGGATGAGACTGGAGGCTGATGAAATTGGCATGAACCATGTTATGTCAGAAAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTCTTAACCCTTAGGTCAATGGTCCCTTCAATCAGTAAGGATGATAAAGTTTCAATACTAGATGATGCAATTGAATACCTTAAAAAGCTTGAGAGAAGGATAAAGGAGTTGGAAGCTCATAGGGGGGTAACAGATATTGAGAGTGGGACTAGAAGATCACTTCAAGACATGGTGGAGAGGACTTCTGATCATTATTATAGCAAAAATAATAATGGCAAGAAACCAGTGGTAAAAAAGAGGAAGGCTTGTAGTGTAGAAGGAAGAGAGATTAATTCAGATGCTTTAAAAGGAAGTTATGCTAATGATGTTACTGTGAGTACTAGTGACAATGAAATTGTGATCCAAATTAAGTGCCCCTCAAGAGCAGGAAGGATGCTGGAAATTATGGAAGCAGTTAACAGTTTCAATATAGATTTTAATTCAGTTCACTCAACAGAAGCTGATGGAAATCTTCATCTCACCATTAAATCTGTGTTAACAGGACCAAGTGTTGCAACAGCCAAAAGAATCAAACAAGCACTCCAAAAAGTGGCTTCGAAGTGC 1866 0.4078 MVPDNMKKQLALAVRSINWCYAIFWTDSTTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELFKSLKTAEIIPQTKRPSAALSPEDLTDAEWYYLVCMSFTFNIGQGLPGKTLAKGQPIWLNNAHSADCRVFTRFLLAKTVVCFPFMEGVIELGITEHVSEDLSLIEGIKTSFLNSLHVNVPNKSGATLKSRNQEDLAYVEFDHNAYNVESVPEVGYDIANTTSPNSCSNAFQANQPLEETLMVERITSGTSQVQSWQVMDDELSNCIHNSMNSSDCISQTFASPDNIASAPKCNNTSDPCARDLQKCNNPKMTLVDPKNDGWHYQRVLSSLLKGSDQLLMGMHFQKFHQESSFVSWRKGGPMDYQWPRGGNSQKLLKKVLFEVPQMHSDGLHESQEENDYKEGMRLEADEIGMNHVMSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIEYLKKLERRIKELEAHRGVTDIESGTRRSLQDMVERTSDHYYSKNNNGKKPVVKKRKACSVEGREINSDALKGSYANDVTVSTSDNEIVIQIKCPSRAGRMLEIMEAVNSFNIDFNSVHSTEADGNLHLTIKSVLTGPSVATAKRIKQALQKVASKC 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18206g00001 622 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 424 484 IPR036638 GO:0046983
Mupr18206g00001 622 SMART finulus 428 477 IPR011598 GO:0046983
Mupr18206g00001 622 Gene3D - 421 484 IPR036638 GO:0046983
Mupr18206g00001 622 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 422 471 IPR011598 GO:0046983
Mupr18206g00001 622 Pfam Helix-loop-helix DNA-binding domain 426 472 IPR011598 GO:0046983
Mupr18206g00001 622 Coils Coil 461 488 - -
Mupr18206g00001 622 PANTHER TRANSCRIPTION FACTOR TT8 4 620 - -
Mupr18206g00001 622 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 184 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18206g00001 Mupr-Chr18206 2050 5465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18206g00001 2 622 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 44.292 4.30e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr18206g00001 bHLH-MYC_N 4.1e-44 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18206g00001 - - gmx:100795524 1071.61