Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18199g00001 ATTCACAATTTCTACCTCCAAAGATTAAAAAGAGAAAAAGCCTACACCCTCCCTATTCCTTCTACTTCTGGCGCCATTTGCAGCCTCCTCTTCGTTCAAACTCCACCCTTTTCCTCTCCTTCCATTTCTGGAAACACCCTCATGGAACAACCACCACCACCACCACCACCACCCTTCAACAGTAACACCACCGTTTCCGCAGGCTCACCCCCACCTTCCGCAATGAACATGAGCATTAACGTTGCCAAACCCGAAACCGAAACAGCAACGGTGGTTCCTCCAGTGCTAGCCACAACAACAACAACACCAACACCAACACCAACGCCGGGGAGTTTTGATTTGTTTGGGAAGAAGAAGAGAGGGAGGCCGAGGAAGTACGACGCAGATGGGAACCTGAGGGTGAGTGCAACGCCGACACCGCCGCCGCCGCCGGGCTTCACTCTCTCCACGCCTTCGGAGTTCTCTTCCAAGAGGGGGCGTGCCAAACATGGCCTTGGCAACTACCAACTCATTTCTTCTTTTGGCGAGGTGTTTGCGAACACAGCTGCTGGGGATTTTATACCGCATGTGGTGACTGTTTATACTGGAGAGGATGTTGCTGGAAAGATCATGTCATTTGCCCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCAAATGTCACCATTCGCCAACCTGGGTCTTCTGGTGGCATATTGACTTACGAGGCATGGTCTCTTAGATCTCAATGTTTTTTGAAATATGGATGCCATATAGGACAGCATTGGGTGCATTTATGTCAGGGTCGATTTGAGATTTTATCGTTGTCTGGATCATTCACTACGATCTCTGACAACAGTGGCAGTGGCATGAGAAGTAGAACTGGTGGATTGAGTGTCTCACTTGCTGGCCCTGATGGTAGGGTGATAGGAGGTGGTGTTGCTGGACTTTTAACAGCTGCTGGTCCCATCCAAATTGTGGTAGGAAGCTTCATGCAAAATGGTTACAAGGCCCAAAAAAGGAAGTATCAACGTGAACAACAAACAGTGGCCTCCCCTACTTCAGCTGGTCCAGATATAGTGACAGCAGCAAGACCTATCTCACAAGCAAATGCTGATGGTGGAAATTTTCTGATACCTATGCCTCAGTTACCAGATCAAAACCAGAGAGAATCTGTCAGTGCTACAAGTGATAAACTGAACCTAGATGCTACACCTGATGCTGCTACTTGGAACGGTGATGCAGAGGCTGACATGGTGTATGAGATGATCAAAGACTTTGTAGGCTATTCTGTTGGGATTGTT 1299 0.4834 IHNFYLQRLKREKAYTLPIPSTSGAICSLLFVQTPPFSSPSISGNTLMEQPPPPPPPPFNSNTTVSAGSPPPSAMNMSINVAKPETETATVVPPVLATTTTTPTPTPTPGSFDLFGKKKRGRPRKYDADGNLRVSATPTPPPPPGFTLSTPSEFSSKRGRAKHGLGNYQLISSFGEVFANTAAGDFIPHVVTVYTGEDVAGKIMSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEAWSLRSQCFLKYGCHIGQHWVHLCQGRFEILSLSGSFTTISDNSGSGMRSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFMQNGYKAQKRKYQREQQTVASPTSAGPDIVTAARPISQANADGGNFLIPMPQLPDQNQRESVSATSDKLNLDATPDAATWNGDAEADMVYEMIKDFVGYSVGIV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18199g00001 433 MobiDBLite consensus disorder prediction 98 159 - -
Mupr18199g00001 433 SUPERFAMILY AF0104/ALDC/Ptd012-like 185 336 - -
Mupr18199g00001 433 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 78 386 IPR039605 GO:0003680
Mupr18199g00001 433 MobiDBLite consensus disorder prediction 47 61 - -
Mupr18199g00001 433 Gene3D - 188 348 - -
Mupr18199g00001 433 ProSiteProfiles PPC domain profile profile. 183 354 IPR005175 -
Mupr18199g00001 433 MobiDBLite consensus disorder prediction 115 129 - -
Mupr18199g00001 433 MobiDBLite consensus disorder prediction 41 70 - -
Mupr18199g00001 433 Pfam Plants and Prokaryotes Conserved (PCC) domain 188 330 IPR005175 -
Mupr18199g00001 433 CDD DUF296 188 329 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18199g00001 Mupr-Chr18199 3106 7517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18199g00001 117 356 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 46.693 1.49e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18199g00001 - - gmx:100779227 464.151