Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18191g00001 ATGGAACAGGGTCAATGTTGGACAAAGAGGAAGTACTCTTTGAGCTCTGGTCTTAGTTCACCAACAAACCCTTCTTCCTATGGTGACTCATGGGAAGAACAAGCTTTTGCAGAAGATGCAGCTAATTCTCTTGGTGGTTGCATATGGCCACCAAGGTCATACTCTTGTAGCTTTTGCAGAAGAGAGTTCAGGTCAGCACAGGCTCTAGGTGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGACTAAAGCAACAACCCTCTAGCCCCCACAATGAAATTCTATGCCATGACCTGGAAACTCAACTCCACAAGCCAGTTCAAAGTCCCTTTGCTTCTTTGGGTGGTTACCTATACCCTTCTCCTGTTTGTGGATTGGCTTTTAAAAATACTAACCCTAATTCTGATCCTGATTTTGTTGCTTCACCTTCTTCATCACCCTCACCTTCCAAGGCCTTATTAGCTCCATCAGTTGATATTGGTAGCTGCAGAGAGGAAACCATGATTCCACTTTATGATTCCTCTATTCTCCACAAGATTTCTCCTGTCAGTAATTCTTCTGAATCATGGCCAAATTTAGCTGAAGATCAGAGACTATATTCATGTAAGCTCCACCGTCAAGCTGATATTGAGAAACCCTCCAAGGGAATAATAATGGATTCTAGGTGTAGGGATAATAAGGGGGATAATGATGATGCTTATGGGGATATGAGCTTCAATTCAGTTGTGAATAGAACTCACCCATCTTTGCAGTTTGAGAGTACTAAAGAGGCAGATCACAACAGTTGCAAGAAGAGGAAAACAGATGCTTCCTCAACTCTATTTTCCCCAAAGTCAAGCTCTGTTGATAGACATCATGTTCAGCCAAACATGTTTGAATTTAGCCCTAGCTCAATGGAAGAGCTAGATCTGGAGTTAAGGCTTGGTAACAGGTCCAAGTACCTCACTGACATTCCATCAGACAAACAACTAAACTAA 978 0.4233 MEQGQCWTKRKYSLSSGLSSPTNPSSYGDSWEEQAFAEDAANSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQPSSPHNEILCHDLETQLHKPVQSPFASLGGYLYPSPVCGLAFKNTNPNSDPDFVASPSSSPSPSKALLAPSVDIGSCREETMIPLYDSSILHKISPVSNSSESWPNLAEDQRLYSCKLHRQADIEKPSKGIIMDSRCRDNKGDNDDAYGDMSFNSVVNRTHPSLQFESTKEADHNSCKKRKTDASSTLFSPKSSSVDRHHVQPNMFEFSPSSMEELDLELRLGNRSKYLTDIPSDKQLN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18191g00001 325 MobiDBLite consensus disorder prediction 252 267 - -
Mupr18191g00001 325 MobiDBLite consensus disorder prediction 1 31 - -
Mupr18191g00001 325 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
Mupr18191g00001 325 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Mupr18191g00001 325 Gene3D Classic Zinc Finger 51 104 - -
Mupr18191g00001 325 PANTHER OS07G0101800 PROTEIN 25 311 - -
Mupr18191g00001 325 MobiDBLite consensus disorder prediction 268 287 - -
Mupr18191g00001 325 MobiDBLite consensus disorder prediction 252 287 - -
Mupr18191g00001 325 SMART c2h2final6 54 76 IPR013087 -
Mupr18191g00001 325 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Mupr18191g00001 325 MobiDBLite consensus disorder prediction 1 30 - -
Mupr18191g00001 325 Pfam C2H2-type zinc finger 54 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18191g00001 Mupr-Chr18191 2474 4305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18191g00001 30 144 C2H2 Transcription Factor Family AT2G37740 47.917 2.46e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr18191g00001 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18191g00001 - - gmx:100801427 545.814