Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18185g00001 ATGGTGCAACTTAAGGTACTGGGCTTAGCTTTAGCTTTGATATGGTGGAGCAGTAATATTGTTGAAGGTGCAGTTGCAGGTTCACAGACACGTCTAATAAACAGTGGGTGCAGCCCATTCAATGCTTCGAACGTGCGTAGCTTCTTTGCGAACGTCAATGATACATTTTCAGAGATGAGAGGAGAAGTTAGAAATCAAAGCAAGCACTTTGTGACATCACAGAAAGCAAGGGGAGGGCTTCTCGCATATGCTATGTTTCAATGCAGAAACTATCTCTCCATAAATAGCTGTCTTTCTTGCTTTGCTACTGCCTCCATCCAAATCCGCAACTGCTCAAAAGCCAATGGCGCCAGAGTCATCTACAATGACTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTACGATCAGGCTAATGAACTTGGCAGTGGAGTAACATGTGGGAACACGAGTTCAAATGCCACTGGTTTTAGAGCAGCTGCACAAAAAGCACTAATAGATCTCCAAACAGCAACACCCAAAATTAAAGGGTTTTATGCAGCTACTAAGACAAAGGTGGATGGTGGCAGTGCAATTTATGCCATTGCACAGTGTGTTGAAACTACCACAGAGACTAATTGTCTGAATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGTCTTCCCAACACAGATGGTACAGCATATGATGCTGGCTGTTTTATGAGATACTCCACCACACCCTTCGTTGCTGATAATCAAACCATTGATACGGCACCCTATTTAAAACAAGGAGGTTCAAGCAAGAAGTGGGCTATTATAGGTGGTGTTATAGGATCTGTTCTTCTCATCCTTTTGTTCTTTGCTTGGAGATGGACTAGAAAAACAAAGAGGGTTCACAGAGTTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAACTACAAGTATAAAGATTTGAAAGCTGCAACAAAAAATTTCAGCGTTGAAAATAAACTTGGAGAAGGAGGTTTTGGTGCAGTATACAAGGGTACTCTGAAAAATGGAAAAATTGTTGCCATCAAGAAACTGGTGTTGGGGAAATCTAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGAAATCTCGTTAGACTTCTTGGTTGCTGCAGTAAAGGGGAAGAGAGAATCCTGGTTTATGAGTACATGGCAAATAGTAGCCTTGACAGATTCTTATTTGGTGACAAAGGTTTCCTCAATTGGAAACAACGCTATGATATAATTTTGGGTACAGCAAGGGGACTAGCATATCTACATGAGGAATTCCACGTGTCCATCATACATAGAGATATAAAGACCGCTAATATCCTCTTGGATGATGATTTTCAGCCCAAAATTGCTGATTTTGGGTTGGCAAGGCTTCTGCCAGGGGATCGTTCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATGCATGGTCAATTATCAGAGAAAGCTGATACCTACAGCTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTGAAAAATCAGGAGGATGTTCGTGAATACCTTCTTCAGAGAGCATGGAAACTATATGAGAGAGGCATGCAGTTGGAGGTGGTGGACAAGGGCATAGACCCTAATGAATATGATGCAGAAGAAGTGAAGAAAATAATAGAAATTGCATTATTATGCACTCAGGCATCAGCTGCAACGAGGCCAACGATGTCTGAAGTAGTGGTGCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTTCGACCATCTATGCCTGTGTTTGTTGAAACAAATATGATGAATAGGGAAGGCAACAACTCTGTTGGTTCATCTAATGCTACTGTCTCCATTTCTGTTTTATCAGCTCGATGA 1914 0.4169 MVQLKVLGLALALIWWSSNIVEGAVAGSQTRLINSGCSPFNASNVRSFFANVNDTFSEMRGEVRNQSKHFVTSQKARGGLLAYAMFQCRNYLSINSCLSCFATASIQIRNCSKANGARVIYNDCFLRYESERFYDQANELGSGVTCGNTSSNATGFRAAAQKALIDLQTATPKIKGFYAATKTKVDGGSAIYAIAQCVETTTETNCLNCMQVGYNNLQSCLPNTDGTAYDAGCFMRYSTTPFVADNQTIDTAPYLKQGGSSKKWAIIGGVIGSVLLILLFFAWRWTRKTKRVHRVDILGATELKGPVNYKYKDLKAATKNFSVENKLGEGGFGAVYKGTLKNGKIVAIKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGEERILVYEYMANSSLDRFLFGDKGFLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTANILLDDDFQPKIADFGLARLLPGDRSHLSTKFAGTLGYTAPEYAMHGQLSEKADTYSYGIVVLEIISGQKSTDVKNQEDVREYLLQRAWKLYERGMQLEVVDKGIDPNEYDAEEVKKIIEIALLCTQASAATRPTMSEVVVLLKSKSLVEHLRPSMPVFVETNMMNREGNNSVGSSNATVSISVLSAR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18185g00001 637 FunFam Cysteine-rich receptor-like protein kinase 2 29 133 - -
Mupr18185g00001 637 ProSiteProfiles Protein kinase domain profile. 321 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18185g00001 637 Gene3D - 29 133 IPR038408 -
Mupr18185g00001 637 Gene3D - 142 242 IPR038408 -
Mupr18185g00001 637 FunFam Cysteine-rich receptor-like protein kinase 2 141 242 - -
Mupr18185g00001 637 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Mupr18185g00001 637 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Mupr18185g00001 637 Pfam Salt stress response/antifungal 42 130 IPR002902 -
Mupr18185g00001 637 Gene3D Transferase(Phosphotransferase) domain 1 398 603 - -
Mupr18185g00001 637 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Mupr18185g00001 637 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Mupr18185g00001 637 SUPERFAMILY Protein kinase-like (PK-like) 309 616 IPR011009 -
Mupr18185g00001 637 CDD STKc_IRAK 327 593 - -
Mupr18185g00001 637 FunFam Cysteine-rich receptor-like protein kinase 2 286 397 - -
Mupr18185g00001 637 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Mupr18185g00001 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Mupr18185g00001 637 SMART serkin_6 321 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18185g00001 637 Pfam Protein kinase domain 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18185g00001 637 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 83 617 - -
Mupr18185g00001 637 FunFam Cysteine-rich receptor-like protein kinase 2 398 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18185g00001 Mupr-Chr18185 1011 5593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18185g00001 2 637 Receptor kinase-like Gene Family AT1G70520 36.141 5.80e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr18185g00001 Pkinase 8.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18185g00001 - - gmx:100801131 1025.77