Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18183g00001 ATGTCGTCCTTTGCTTCGTTTATGCTTATTTTCCTTTGTTATCATGCACTTCCTGCTCTGGCTGATCCAAGAGACACAGAGGTAGCAGTGTTGTGCACCAACACAACAGCACCAATGCCTCAGCAACAAGCTTTCGTAGCAAACTTCTACGATGCCTTGGAAGCCTTAACCGCTTTGGTTACAAGGCAAAGATATGCTCTTGTTGTTAAAGGGACTACTCAAAATAATGCCACTACTGTTTATGCTTTTGGTGAGTGCATGAAAGATCTTTCCAAACCAGATTGTGATCTCTGCTTTTCGCGGTGCAAGACACGTGTCCTTCGGTGCCCTCCATTTCAGAGAGGCATTCATGGTGGCAGGATCCTCTTTGATGGGTGCTATCTTAGGTATGATGGCTACAACTTCTTCAATGAGAGTCTCAGTTCTAAGGACATGACTGTTTGTGGAACCGAAGATTTTAGTGGGAATTGGAGTGTGTATAAGGCCAATACTCTGGAGTTGGTGAGAAATTTGAGCGTGGAAGCACCAAAGAATGAAGGGTTCTTTGTGGGGTATGTGAGTCTAAGGAATGTGACTGTTTATGGGTTGGCTCAATGCTGGAAGTTTGTGAATGCCAGTGCCTGTCAGAACTGTTTGGCTGAAGCTATCACTAGGATTGACTTATGTTCTCCAAAAGAGGAAGGGAAGGCATTGAATGCTGGCTGTTACTTGAGGTATTCCACTCACAATTTCTATAATAGTTCAAACAACAATGCACCTCAAGTAAATCAAGGTCAGTTGCTGCCACTGTTGGGAAATTTCACTTTTCTCTCTGTTTTACCTCGTGTTACTGTGTTAGGAAATAAAAATCTTGCCATAATTGTGGCTGCATCATCTTCTTCCCTGGCTCTTCTGCTGATTGTTGCAACTGTGATTTTCTTTGTGAGGAGAAATGTACTGCAGCGGAGGAGAGAAAGAAGACAATTTGGTGCACTTTTGGACTCGGTGAACAAGTCCAAACTGAATATGCCATATGAAGTTCTTGAAAAAGCCACAGATTACTTCAGTGATTCCAATAAGCTAGGACAAGGGGGATCAGGAACAGTTTATAAAGGAGCTCTACCAAATGGCACTACAGTGGCTATAAAAAGGCTTATCTTTAACACATCACAATGGACAGATCATTTCTTCAATGAGGTCAATTTGATCAGTGGCATTCATCACAAAAATCTAGTGAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATTCGTGCCTAATCATAGCCTCTATGATCACCTATCTGGTAGAAGGAATTCTCAACAGTTAACATGGGAAGTGAGGCATAAAATCATATTGGGAACGGCTGAGGGCTTGGCCTTTCTTCATGAGAAATCACAGAGAATCATTCATAGAGATATCAAATTAGGCAACATTCTCATTGATGATAGCTTCACACCCAAAATTGCTGATTTTGGACTTGCTAGACTATTTCCAGAAGACAAGTCTCACCTTAGCACAGCCATTTGTGGCACATTGGGTTATATGGCCCCAGAGTATGTAGTCCTTGGGAAGTTAACTGAGAAAGCAGATGTCTACAGTTTTGGAGTTATAATTATGGAAATTATATCTGGCAAAAAGAGCAAATCTTTCGTTCAAAATTCATATTCCATCTTACACACGGTTTGGAGCCTTTATGGATCAAACAGGCTATGTGACATTGTTGATCCAATCTTAGAGGGAAGTTATCCAGCAGAGGAAGCATGCAAACTCCTTAAGATAGGGTTACTTTGTGCACAAGCATCTGCAGAGCTTAGACCACCAATGTCAATAGTTGTGGAAATGATTAATAACAATCATGAAATTACTCAGCCAACACAACCACCCTTTCTTAATTGTAGTAGTGCAGAATTCAGCAAACCTATTTTACCAGGAGACAGTTTTCAGCCTAGATCCTACATTCACTCTTCAGAGGACAGCATGACCGAAAGTCTGATGCAGCTTGTAGATGATTGCTAA 2016 0.4142 MSSFASFMLIFLCYHALPALADPRDTEVAVLCTNTTAPMPQQQAFVANFYDALEALTALVTRQRYALVVKGTTQNNATTVYAFGECMKDLSKPDCDLCFSRCKTRVLRCPPFQRGIHGGRILFDGCYLRYDGYNFFNESLSSKDMTVCGTEDFSGNWSVYKANTLELVRNLSVEAPKNEGFFVGYVSLRNVTVYGLAQCWKFVNASACQNCLAEAITRIDLCSPKEEGKALNAGCYLRYSTHNFYNSSNNNAPQVNQGQLLPLLGNFTFLSVLPRVTVLGNKNLAIIVAASSSSLALLLIVATVIFFVRRNVLQRRRERRQFGALLDSVNKSKLNMPYEVLEKATDYFSDSNKLGQGGSGTVYKGALPNGTTVAIKRLIFNTSQWTDHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLYDHLSGRRNSQQLTWEVRHKIILGTAEGLAFLHEKSQRIIHRDIKLGNILIDDSFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYVVLGKLTEKADVYSFGVIIMEIISGKKSKSFVQNSYSILHTVWSLYGSNRLCDIVDPILEGSYPAEEACKLLKIGLLCAQASAELRPPMSIVVEMINNNHEITQPTQPPFLNCSSAEFSKPILPGDSFQPRSYIHSSEDSMTESLMQLVDDC 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18183g00001 671 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Mupr18183g00001 671 SMART serkin_6 348 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18183g00001 671 Pfam Protein kinase domain 349 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18183g00001 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Mupr18183g00001 671 FunFam Cysteine-rich receptor-like protein kinase 2 314 423 - -
Mupr18183g00001 671 FunFam Cysteine-rich receptor-like protein kinase 2 424 623 - -
Mupr18183g00001 671 ProSiteProfiles Protein kinase domain profile. 348 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18183g00001 671 CDD STKc_IRAK 354 617 - -
Mupr18183g00001 671 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Mupr18183g00001 671 ProSiteProfiles Gnk2-homologous domain profile. 141 244 IPR002902 -
Mupr18183g00001 671 FunFam Cysteine-rich receptor-like protein kinase 3 144 244 - -
Mupr18183g00001 671 SUPERFAMILY Protein kinase-like (PK-like) 333 645 IPR011009 -
Mupr18183g00001 671 Pfam Salt stress response/antifungal 152 241 IPR002902 -
Mupr18183g00001 671 Pfam Salt stress response/antifungal 32 131 IPR002902 -
Mupr18183g00001 671 Gene3D - 142 244 IPR038408 -
Mupr18183g00001 671 Gene3D - 25 135 IPR038408 -
Mupr18183g00001 671 ProSiteProfiles Gnk2-homologous domain profile. 26 135 IPR002902 -
Mupr18183g00001 671 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 81 639 - -
Mupr18183g00001 671 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18183g00001 Mupr-Chr18183 1843 4906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18183g00001 18 512 Receptor kinase-like Gene Family AT1G70530 54.728 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr18183g00001 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18183g00001 - - gmx:100802190 1117.83