Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18176g00001 ATGGAATCTGATCATGATCATGATCATGATCATCAACAAGCATCAGAAAATCCCAGTGATGTTGGGGAGGAGCAAGGTGCAAGTAACGTGACATGGAGGTCCTACGAGTGCAACTTCTGCAAGAGGGGGTTCTCTAATGCACAAGCACTGGGGGGGCACATGAACCTCCACAGAAAAGACAAGGCCAAGCTTAAGCAATTACAACAATCTTCAACCCAAACTCAACCATCTTTGGAAGACAAGGTCTCTCCACAGGATCAGGCCAACAACAAAGAAAAATGGAATTGGAGTGTGTCTCAACAAGAACATGCCTCATCCAGAGCCATTCACACCAGGCAGCTTCCACTCTTTGCTGAATCACCAACTAGCACCGAAACACAAGAGTCTCAAGCTCAAACTCAACCACCTTTGTTAACTATCCAAGATTCCTCATCAGAGTTTCATCATGGACTCAAGATAATATCACGGGGTTACTATGATGACCTCTTGAGGTTCAAATGCAAATAA 507 0.4458 MESDHDHDHDHQQASENPSDVGEEQGASNVTWRSYECNFCKRGFSNAQALGGHMNLHRKDKAKLKQLQQSSTQTQPSLEDKVSPQDQANNKEKWNWSVSQQEHASSRAIHTRQLPLFAESPTSTETQESQAQTQPPLLTIQDSSSEFHHGLKIISRGYYDDLLRFKCK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18176g00001 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Mupr18176g00001 168 PANTHER OS07G0101800 PROTEIN 13 132 - -
Mupr18176g00001 168 Gene3D Classic Zinc Finger 22 112 - -
Mupr18176g00001 168 MobiDBLite consensus disorder prediction 1 17 - -
Mupr18176g00001 168 SUPERFAMILY beta-beta-alpha zinc fingers 33 62 IPR036236 -
Mupr18176g00001 168 MobiDBLite consensus disorder prediction 60 107 - -
Mupr18176g00001 168 MobiDBLite consensus disorder prediction 1 28 - -
Mupr18176g00001 168 Pfam C2H2-type zinc finger 35 59 - -
Mupr18176g00001 168 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Mupr18176g00001 168 MobiDBLite consensus disorder prediction 66 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18176g00001 Mupr-Chr18176 225 2460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18176g00001 33 66 C2H2 Transcription Factor Family AT3G09290 79.412 8.06e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr18176g00001 zf-C2H2_6 1.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18176g00001 - - vun:114170729 145.206