Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18169g00001 ATGGAAGAGCCGGTTGTGGTTAACAAAGGAGATGAGCCTTTGGATTTGCCTCCAGGTTTCAGGTTCCACCCCACAGATGAGGAGATCATCACTTGTTACCTCACAGAGAAGGTGTTGAATAGAGGTTTCAGTGCAACTGCTATTGGGGAAGCTGATTTCAACAAGTGTGAGCCTTGGGACTTGCCCAAGAAAGCAAAGATGGGGGAGAAAGATTGGTACTTCTTTTGCCAAAGGGATAGGAAGTATCCAACAGGCATGAGAACCAATAGAGCAACCCAAACTGGGTATTGGAAGGCCACTGGCAAAGATAAAGAGATTTACAAGGGGAAGGGCAATCTTGTGGGGATGAAGAAGACCCTTGTGTTCTATAGAGGAAGAGCTCCAAAGGGAGAGAAGACAAATTGGGTTATGCATGAATTCAGATTGGAAGGCAAATTCGCATGCTACAACCTTCCTAAGGTTGCAAAGGATGAATGGGTTGTGTGCAAGGTTTTCCACAAGAGCAACACAGATGTTAACAAAAGGGTCCCAATTATTAACCCTGGCCTTCTGAAAATAAACTCAATTGGAGAAGATCTATTTGATTTCTCTTCACTTCCACCTCTCGTGGATCCTCTCTACGACCAAACCTCAAACAAGTACATTGACAATGATTTCAAGGGCACTACTAGTACTAATACTAATAGTACTAACACACCTTCATCATCATCAGCTAAACCACCTTCACATGGCTATTATCTTCCTAACTTGATCGACAACAACAACAATCAGCATCAGATGATGATGATGAAGCCAGAAGAGCACAGAAACTATGAGATTCTCCCCACCAACAACTATGCCACCACCAGCCAAGGGAATTTCACTGCTAATAACCCAATGGGAATTAGCACAAGCACAAGCAATACCCTCCAACTTCAAAATTCAAGCTCACCCTTCAACATGCTCCCAGATTATTACTACATGCACCAAGGCAAGAACAATTCCAAGTACGTTTCTGAATTGGACAACAAACAATGCAAGATGGAGCAATTCTCCAACCAGCCTGTGGTCAGTGCCTCTCAAGACACGTGCCTGAGCAATGACACTTCCTCGGTGGTTTCGAAGCAAGACATGGGAATAAGGAACAAGGCATTGTACGAGGATCTTGAAGGTCCTTCATCAGTTGCCACCCTCTCAGATTTGGAATGCCTCTGGGATGATTACTGA 1206 0.4411 MEEPVVVNKGDEPLDLPPGFRFHPTDEEIITCYLTEKVLNRGFSATAIGEADFNKCEPWDLPKKAKMGEKDWYFFCQRDRKYPTGMRTNRATQTGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFACYNLPKVAKDEWVVCKVFHKSNTDVNKRVPIINPGLLKINSIGEDLFDFSSLPPLVDPLYDQTSNKYIDNDFKGTTSTNTNSTNTPSSSSAKPPSHGYYLPNLIDNNNNQHQMMMMKPEEHRNYEILPTNNYATTSQGNFTANNPMGISTSTSNTLQLQNSSSPFNMLPDYYYMHQGKNNSKYVSELDNKQCKMEQFSNQPVVSASQDTCLSNDTSSVVSKQDMGIRNKALYEDLEGPSSVATLSDLECLWDDY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18169g00001 401 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Mupr18169g00001 401 MobiDBLite consensus disorder prediction 218 244 - -
Mupr18169g00001 401 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 293 - -
Mupr18169g00001 401 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Mupr18169g00001 401 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Mupr18169g00001 401 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Mupr18169g00001 401 FunFam NAC domain-containing protein 100-like 25 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18169g00001 Mupr-Chr18169 2718 4389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18169g00001 1 207 NAC Transcription Factor Family AT5G18270 72.897 9.26e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr18169g00001 NAM 8.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18169g00001 - - gmx:100813376 629.017