Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18165g00002 ATGAAAGGAGGAAAGTCCAAAACCGAATCCAAGAGAGCCGATGCCAAGCTCGCTGTGAATAAGAAGGCTGGCGCCACCAAGCCAGCCAGGAAACCGGCCGGCAAGGGGAAGGCAGCGAAAGACCCTAACAAGCCAAAAAGGCCTCCCAGCGCTTTCTTCGTTTTCATGGAGGAGTTCAGGAAGCAATTCAACAAGGAGCATCCTGACAACAAAGCAGTGTCCGCTGTGGGGAAAGCTGCTGGAGCAAAATGGAAATCGATGTCTGATGCAGAGAAAGCACCTTATGTTGCCAAGTCTGAGAAGCGAAAGGTGGACTATGAGAAGAGCATGAGAGCCTACAACAAGAAACAGGCGGAAGGTCCTACTGGTGGGGATGAAGAGGAATCTGAGAAATCAGTATCTGAGGTGAATGATGATGATGAAGACGAGGAAGGCAGTGCCGAGAACGTCTTTAGGACCGATCTTGTAGCGTGA 474 0.5063 MKGGKSKTESKRADAKLAVNKKAGATKPARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKEHPDNKAVSAVGKAAGAKWKSMSDAEKAPYVAKSEKRKVDYEKSMRAYNKKQAEGPTGGDEEESEKSVSEVNDDDEDEEGSAENVFRTDLVA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18165g00002 157 Gene3D High mobility group box domain 29 124 IPR036910 -
Mupr18165g00002 157 MobiDBLite consensus disorder prediction 1 52 - -
Mupr18165g00002 157 CDD HMG-box_AtHMGB1-like 46 106 - -
Mupr18165g00002 157 Coils Coil 96 116 - -
Mupr18165g00002 157 MobiDBLite consensus disorder prediction 94 130 - -
Mupr18165g00002 157 SUPERFAMILY HMG-box 33 119 IPR036910 -
Mupr18165g00002 157 SMART hmgende2 44 115 IPR009071 -
Mupr18165g00002 157 MobiDBLite consensus disorder prediction 79 157 - -
Mupr18165g00002 157 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Mupr18165g00002 157 MobiDBLite consensus disorder prediction 1 18 - -
Mupr18165g00002 157 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Mupr18165g00002 157 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 144 IPR031061 -
Mupr18165g00002 157 MobiDBLite consensus disorder prediction 131 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18165g00002 Mupr-Chr18165 5068 8260 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mupr18165g00002 HMG_box 4.6e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18165g00002 K25507 - gmx:100500173 222.631