Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18158g00001 ATGAATAAGCAAGTGATGCTCCTTCTTCCCCTACTCATGTCCCTCTTTAGCAGTGGTTTATCTTCCTCATGCCCCATGGATCTCAGCTATGTTGAGACCTTTCCCTGGGACACTTCAGCCTGCAGAGACCCAATTGATAAGGAGCACTGCTGCCAAGCTTTGCTCAGTGTCATTGGCATAGGGCTATCCCAACACCTCAAAGAAACATCCTTGTTTCAACTTCCCAATGAAAACACTTCCTCCACTTGCTTATCTGATTTTCAAACCAAACTCACTTCCTTGTCAATTGAACCATCTTTGGTTCCTTCTTGCTTCCCAAACTCATCACAGTTTGTTACCAACTCTTCCACTTGTGCAGGAATTATAACCATCCAAGATTGGAAGCAAAGGGTGGGCTTGATTACCCCATTAGACACTTCTTGCAACGGTGACCTCAGCGATCAAACTAGCTGCAGCATTTGCTCTGACGCAGGCCTCAAAGTGACCTCTCAGCTCAACACCATCGACCCAAATGCCACAAAGTGTTTTTACTTCACAGTTTTGTATGCCTCAGCTATTGTCAATAAGTTTGGTCCAACAAATTTAGACACGGCTGGTTGCATTCTAGGCATGCCGCTGTCGAAAGGGTCGTCGAATAGAAAACAAGTGCTGAGACTTGTTGTTGGGTTGTTGGGTGGTGTTATTGGTGTTATGCTTGCTTTTGTGTTGATAGTCATGTACAGGAAGTGGGATAAGAGAAGGAAGGAGGATAAGTATCACAGGTCGGTTGAAAACGGTGTCAGGAACAGTGTTTTGCCTAACACTGGCGCCAAATGGTTTCACATATCGGAGCTTGAACGCGCCACTAATAAATTCTCGCAGAAGAATATGGTTGGCCAAGGTGGTGATGGAGTTGTGTACAAAGGGACTCTTTCGGATGGCACTGCGGTTGCAGTTAAGGAGATTTTTGATTTGGACACTAAAGGGGATGAAGAGTTTTGCTATGAGGTGGAGATCATAAGCAAAATAAAGCACAGGAATCTTCTCGCGCTTCGGGGTTGTTGCGTTGCGAGTGACAATTTGAAAGGTAAGAGAAGGTTTCTGGTTTATGATTTCATGCCTAATGGTTCCCTCAGTTACCAATTATCTGTTTTAGGGGCTAATAGGCTAACATGGCCACAAAGAAAGAACATAATTCTTGATGTAGCTAAGGGGCTTGCTTATTTGCATTATGAAATAAAACCCCCAATTTATCACCGTGACATAAAGGCTACCAACATACTTTTGGACTCCAAAATGAAAGCTAAGGTGTCAGATTTTGGATTGGCCAAGCAAGGTAACGAGGGCCAATCTCATCTCACCACCAGGGTTGCTGGCACATACGGTTATTTGGCGCCAGAGTATGCTCTGTATGGACAACTAACAGACAAGAGCGATGTGTACAGTTTTGGCATTGTGATTCTTGAGATCATGAGTGGAAGAAAAGTCCTTGATACTTTGAATTCACCTGTTGTTTTAATCACGGATTGGGCATGGACGCTTGCAAAATCAGGGCAGGTACAGGAAATTTTTGACCAGTCTATAAGAGAAGAAGGGCCAGAGAAGATCATGGAAAGGTTTGTTCTTGTGGGGATTCTTTGTGCTCATGCAATGGTGGCTTTAAGGCCTACTATTGCTGAGGCCCTTAAGATGTTAGAGGGTGATATCGACATTCCACAATTACCAGACAGGCCAGTGCCACTTGGTCATGAATCGTTTCAATTTACTCTCTTGCATGTAAAGTTGTTCGTAATTTCCGGTCCCAATCGTCGTCCACTTGCTTCTCGTGGTTGGCGAAATTCAACGTGTATATTAGAATATGTGGTAGGTCAATTATGTCCAGCTAAGATTCGGATTCCAAATCGTTAA 1887 0.4388 MNKQVMLLLPLLMSLFSSGLSSSCPMDLSYVETFPWDTSACRDPIDKEHCCQALLSVIGIGLSQHLKETSLFQLPNENTSSTCLSDFQTKLTSLSIEPSLVPSCFPNSSQFVTNSSTCAGIITIQDWKQRVGLITPLDTSCNGDLSDQTSCSICSDAGLKVTSQLNTIDPNATKCFYFTVLYASAIVNKFGPTNLDTAGCILGMPLSKGSSNRKQVLRLVVGLLGGVIGVMLAFVLIVMYRKWDKRRKEDKYHRSVENGVRNSVLPNTGAKWFHISELERATNKFSQKNMVGQGGDGVVYKGTLSDGTAVAVKEIFDLDTKGDEEFCYEVEIISKIKHRNLLALRGCCVASDNLKGKRRFLVYDFMPNGSLSYQLSVLGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSKMKAKVSDFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTDKSDVYSFGIVILEIMSGRKVLDTLNSPVVLITDWAWTLAKSGQVQEIFDQSIREEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPQLPDRPVPLGHESFQFTLLHVKLFVISGPNRRPLASRGWRNSTCILEYVVGQLCPAKIRIPNR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18158g00001 628 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 366 566 - -
Mupr18158g00001 628 FunFam Receptor-like serine/threonine-protein kinase At4g25390 250 365 - -
Mupr18158g00001 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Mupr18158g00001 628 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Mupr18158g00001 628 CDD STKc_IRAK 291 560 - -
Mupr18158g00001 628 Gene3D Phosphorylase Kinase; domain 1 246 365 - -
Mupr18158g00001 628 SUPERFAMILY Protein kinase-like (PK-like) 270 575 IPR011009 -
Mupr18158g00001 628 PANTHER OS01G0750732 PROTEIN 47 566 - -
Mupr18158g00001 628 Gene3D Transferase(Phosphotransferase) domain 1 366 564 - -
Mupr18158g00001 628 Pfam Protein kinase domain 286 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18158g00001 628 Pfam SPARK 21 175 IPR043891 -
Mupr18158g00001 628 ProSiteProfiles Protein kinase domain profile. 285 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr18158g00001 628 SMART serkin_6 285 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18158g00001 Mupr-Chr18158 4294 6649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18158g00001 21 581 Receptor kinase-like Gene Family AT1G11050 53.780 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mupr18158g00001 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18158g00001 - - gmx:100820563 1000.35