Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1813g00002 ATGAGAGGAAAGTATCGAGTGGAATGTTTCACTATGAGAGCTAAGAGTTTGATAAGTAAGAGGGAGTTTAGCATAAGATTGAGAAAAATGATCAAGTGTATATGTTCGGGGGAGCAGTTAAGGGTAGATGAGTTAAATTACTCATCAGAGTCCCTTGCAACGAGGGACTATTCGGCAAGTGGTTATTCATCTCGACCTGGTGAAATCGACACAAAGATCGACAATAGCAACATTGAAGAAGCAGAGTCCTCTCTCCGTGAAAGTGGTTACTTAAACTATGAGGAAGCTAGAGCCTTGCTTGGAAGACTTGAGTATCAGAAAGGCAATATCGAAGCTGCACTTCATGTATTTGAAGGAATTGATGTTGCTGCTGTCATTCCCAAGATAAAAGTTTCTATATCTAGAAGATGTGAACCCAATAGACGTCGTTCGCAAAGTGATGCAATGCCTCCTATGTCAATGCATGCTGTTAGTTTACTTCTTGAAGCTGTCTTTCTCAAGGCTAAATCGTTGCAGGCTCTTGGAAGGTTTCAAGATGCTGCTCAGTCATGCAAAACTATTTTAGATACTGTCGAATCTGCTTTACCAGAAGGCTGGCCTGAAAACTTTGTTTCGGACTGTAAACTTCAAGAGACAGTGGCAAATGCTGTAGAACTGCTTCCGGAGTTATGGAAGCTTGCAGGCTCTCCTCAAGATGTTATCTCATCATTTAGGAGGGCCTTGCTTTATTGTTGGAATCTTGACACTGAAGCCACTGCAAGAATACAAAAGGAATTTGCTTTGTTTCTCTTGTACAGTGGTTGTGAAGCAAGCCCTCCTTCTCTTCGCTCTCAGTTGGATGGTTCCTTTGTGCCAAGAAACAACATAGAAGAGGCTGTTCTTCTGCTTCTGATTCTGCTGAGAAAATCTGTTCTTGGAAGCATTGTATGGGACCCTTCATTGATTGATCACCTTTCTTTTGCTCTAAGTGTTTCTGGGGAATTCATGACTCTAGCTCAACAGGTTGAGGAATTGCTTCCTGAAAACATGGAGAGAAAAGAAAGATACTATACTCTAGCACTTTGTTACTGTGGGGAAGGTGAACATATGACTGCTTTGGATCTTTTGAGGAACTCTTTGAATCATAGAGAGAACTCAGACGGCATAAGGGAATTACTTCTAGCTTCAAAAATTTGTGCAGATAACAAGGTTTGCATTGAAGATGGAATCAAATATTCTTGCAAAGCCATTTCTCAGTTATATGGTAAGTGCATGCAGATGGTTGCTATTGCAAATTGCTTGTTAGGTGTTTTACTGTCATCAAAATCCAGGTCAGCTGCTTCTGAATCAGAGAAGGTATTGATGCAGTCTGAAGCACTCAGTGCTCTAAAAGATGCTGAGAGAATGATGAGGGAAAGTGATCCTTACATTGTCCTCCATCTTTGTCTAGAATATGCTGAGCAGAGGAAGTTAAGCATTGCTTTTGAGCATGCAAAGAAACTAATTAAGATTGAGGGTGGATCTAGTGTTAGTGGATATATACTACTAGCACGGATTTTATCAGCTCAAAAAAAGTTTGTAGATGCAGAGCTCGTTATTGATGCTGCTCTAGATCAAAGTGGGAAATGGGATCAAGGAGAATTGTTGAGAACTAAAGCTAAACTGCGGATAGCACAGGGAAAATTAAAGAATGCAGTGGAGACATACACGTTTCTTCTTGCTGTTCTTCAGGTCCAAAATAAAAGTTTAGGCATAGCAAGTAAGGTTGTAAAGAGTAAGGGAAACCGTGACAGAAGACTGGAAATGGAAATATGGCATGATTTAGCCAATGTGTACACGGCCTTATCACAGTGGCACGATGCTGAAGTTTGTCTTGCAAAATCTGAGGCTATTAATCCCTATTCTGCTTCTAGATGGCACACAAAAGGTTTACTTTTTGAAGCCAGAGGTCTTCATCAAGAGGCTCTAAAATCATTTAGGAAAGCATTAGATATTGAGCCCAACCATGTTGCAAGTTTGATATCCACAGCCTGTGTACTGAGACAACTTGGTGGTCAATCATCTTCAATTGTTAGAAGCCTTCTCACTGATGCAATACGCCTTGACAGAACAAACTCATCTGCTTGGTATAATCTTGGACTGCTCTATAAAGCTGATTTGGAGACATCAGCAATGGAAGCTGTTGAATGCTTTGAAGCAGCAGATTTCCTCGAAGAATCTTCTCCCATTGAACCCTTTAGATAA 2223 0.4067 MRGKYRVECFTMRAKSLISKREFSIRLRKMIKCICSGEQLRVDELNYSSESLATRDYSASGYSSRPGEIDTKIDNSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEAALHVFEGIDVAAVIPKIKVSISRRCEPNRRRSQSDAMPPMSMHAVSLLLEAVFLKAKSLQALGRFQDAAQSCKTILDTVESALPEGWPENFVSDCKLQETVANAVELLPELWKLAGSPQDVISSFRRALLYCWNLDTEATARIQKEFALFLLYSGCEASPPSLRSQLDGSFVPRNNIEEAVLLLLILLRKSVLGSIVWDPSLIDHLSFALSVSGEFMTLAQQVEELLPENMERKERYYTLALCYCGEGEHMTALDLLRNSLNHRENSDGIRELLLASKICADNKVCIEDGIKYSCKAISQLYGKCMQMVAIANCLLGVLLSSKSRSAASESEKVLMQSEALSALKDAERMMRESDPYIVLHLCLEYAEQRKLSIAFEHAKKLIKIEGGSSVSGYILLARILSAQKKFVDAELVIDAALDQSGKWDQGELLRTKAKLRIAQGKLKNAVETYTFLLAVLQVQNKSLGIASKVVKSKGNRDRRLEMEIWHDLANVYTALSQWHDAEVCLAKSEAINPYSASRWHTKGLLFEARGLHQEALKSFRKALDIEPNHVASLISTACVLRQLGGQSSSIVRSLLTDAIRLDRTNSSAWYNLGLLYKADLETSAMEAVECFEAADFLEESSPIEPFR 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1813g00002 740 Gene3D Tetratricopeptide repeat domain 422 576 IPR011990 GO:0005515
Mupr1813g00002 740 Gene3D Tetratricopeptide repeat domain 577 736 IPR011990 GO:0005515
Mupr1813g00002 740 SUPERFAMILY TPR-like 336 562 IPR011990 GO:0005515
Mupr1813g00002 740 ProSiteProfiles TPR repeat profile. 629 662 IPR019734 GO:0005515
Mupr1813g00002 740 PANTHER PROTEIN NPG1 31 740 IPR043376 -
Mupr1813g00002 740 Pfam Tetratricopeptide repeat 630 662 IPR019734 GO:0005515
Mupr1813g00002 740 Gene3D Tetratricopeptide repeat domain 68 389 IPR011990 GO:0005515
Mupr1813g00002 740 SMART tpr_5 161 194 IPR019734 GO:0005515
Mupr1813g00002 740 SMART tpr_5 629 662 IPR019734 GO:0005515
Mupr1813g00002 740 SMART tpr_5 595 628 IPR019734 GO:0005515
Mupr1813g00002 740 SMART tpr_5 346 379 IPR019734 GO:0005515
Mupr1813g00002 740 SMART tpr_5 503 536 IPR019734 GO:0005515
Mupr1813g00002 740 SUPERFAMILY TPR-like 540 710 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1813g00002 Mupr-Chr1813 19271 24472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1813g00002 21 740 Calmodulin-binding Proteins AT4G28600 53.333 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1813g00002 K21843 - gmx:100789469 1307.74