Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18120g00001 ATGCGGAGGGGCAGAGGAGGACCACCGGCTGCGGCGGCGGTGAACGGATCCATTTTAAAGGAGCCTCGTTACCGGGGCGTGAGAAAGAGACCGTGGGGAAGGTTCGCGGCGGAGATCAGAGACCCGTTGAAGAAAGCAAGAGTATGGTTAGGAACCTTTGATTCTGCCGAGGAAGCTGCTCGAGCGTACGATGATGCCGCTCGGACTCTCCGAGGTCCAAAAGCCAAAACCAATTTTCCTCTTTCACCCTTCTGTTACCAACACCCAACCACCGATCCTTTCTTCTACGCGGGTTTCCACAACAACCTTAACAACCCTCAGAGACCCACCTCAAGTGGCATGAGTAGCACCGTTGAGTCCTTCAGTGGGCCCCGCCCTCCCACCACGACGCCGTTTTTGACCGCTGCCCGGAGATACCCCCGCACTCCCCCTCTTGTCCCCGAAGACTGCCACAGTGACTGCGACTCTTCCTCCTCCGTCGTCGACGACGGCGACGACAACATCGTCTCCTCGTCGTTTCGTCCTCCCTTGCCGTTCGATCTCAACGCGCTGCCGTTTGACGATGCCGCCGCCGATGACGATCTTCGCTGCACCGCGCTTTGTCTCTGA 609 0.5862 MRRGRGGPPAAAAVNGSILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSAEEAARAYDDAARTLRGPKAKTNFPLSPFCYQHPTTDPFFYAGFHNNLNNPQRPTSSGMSSTVESFSGPRPPTTTPFLTAARRYPRTPPLVPEDCHSDCDSSSSVVDDGDDNIVSSSFRPPLPFDLNALPFDDAAADDDLRCTALCL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18120g00001 202 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Mupr18120g00001 202 MobiDBLite consensus disorder prediction 148 167 - -
Mupr18120g00001 202 SUPERFAMILY DNA-binding domain 23 82 IPR016177 GO:0003677
Mupr18120g00001 202 MobiDBLite consensus disorder prediction 107 133 - -
Mupr18120g00001 202 Pfam AP2 domain 22 72 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 CDD AP2 22 82 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mupr18120g00001 202 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 167 - -
Mupr18120g00001 202 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Mupr18120g00001 202 MobiDBLite consensus disorder prediction 107 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18120g00001 Mupr-Chr18120 3886 4494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18120g00001 1 202 AP2-EREBP Transcription Factor Family AT1G50640 60.526 5.23e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr18120g00001 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18120g00001 K09286 - gmx:100820249 292.352