Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18103g00001 ATGTCCACCGTCAGGGTTCAAGTTTCGGCGTGCGCGCTTTCCGCCACCGTCAACCGCCTTCGCCCAAACGCCGTCGTTTCCTTCAACAACCATTTCGGTTTCAGACCCCTCAGGAAGAAGCCGCTCATAGTCTCAATGTCTTCCGTTCCTCCTTCCCAACCCTTCGAAGTCGCCGTTAAAGCCTCCGTCACCACGCCCAATAGGATCGGCCCTTTTTGCCAAAGGGTATTGCTGACACTGGAGGAAAAACATCTACCTTATGACCCAAAGTTGGTGGATTTGACCAACAAGCCAGAATGGTTTGTTAAAGTCAATCCTGATGGTAAAGTTCCTGTCATAAAGTTTGATGAGAAGTGGGTTCCAGATTCAGATTTTATTACGCAAACATTGGAAGAGAAGTATCCTAGCCCACCATTGGTGACCCCACCTGAAAAGGCCACAGTGGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCCAGAGCAAGGATCCCAATGATGGAACAGAGCAAGCATTACTAAGTGAACTGAGCGCTTTCAATGATTACATCAAGGAAAATGGTCCTTTCATCAATGGTAATGAGATATCTGCAGCTGACCTGTCACTTGGACCAAAGTTATACCATTTGGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTGCCCGATTCACTTACCTCTTTCAAGTCTTATACGAAGGCCATTTTCTCGAGGGAATCGTTCACTAAAACAAGTGCACAACCAGAGGATGTCATTGAAGGTTGGCGTCCTAAAATGATTTTGGAGGCAGTAGAAGCACTGAATGAAGGGAACGGTTCCAATAAATCATCAATTTCGAAGTACATAGAATCTACGTACGGTGGATTGCCTCAGGGCCACAAGGTACTTCTCAATGTGCACCTCGCAAAATTGAGGGACAGTGGGGTGCTACTGTTTTGGAAGAACAACTATGCCAAGCGTAACCCAAACGCGCCACCACGCCGGGGCCGTGGCAGGCCCCCCAAGCCCAAGGAGCCTCTGCCTCTGAACACTATCTTGTCCCCGCCCAGGCCCAGGGGCCGCCCCCGAAAGGGCCCTAATGATCCTCCGTCAAGGACACCCAAGGTTAAGGCTTCGGCTGGGAGTGGCAGGCCTAGGGGCCGGCCCAGGAAGATGGCCCGGCCCGCCGGAGGATTAGGTGAAGCACCACCCTCCACCGTGAAGGCTGGTGCTAGTGGGAGGCCCAGAGGTAGGCCTCCCAAATGTTGCTTGCATGTTTTGCTCGGATCAATGTTGGAGAAATAA 1287 0.5035 MSTVRVQVSACALSATVNRLRPNAVVSFNNHFGFRPLRKKPLIVSMSSVPPSQPFEVAVKASVTTPNRIGPFCQRVLLTLEEKHLPYDPKLVDLTNKPEWFVKVNPDGKVPVIKFDEKWVPDSDFITQTLEEKYPSPPLVTPPEKATVGSKIFSTFIGFLQSKDPNDGTEQALLSELSAFNDYIKENGPFINGNEISAADLSLGPKLYHLEIALGHYKKWTVPDSLTSFKSYTKAIFSRESFTKTSAQPEDVIEGWRPKMILEAVEALNEGNGSNKSSISKYIESTYGGLPQGHKVLLNVHLAKLRDSGVLLFWKNNYAKRNPNAPPRRGRGRPPKPKEPLPLNTILSPPRPRGRPRKGPNDPPSRTPKVKASAGSGRPRGRPRKMARPAGGLGEAPPSTVKAGASGRPRGRPPKCCLHVLLGSMLEK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18103g00001 428 SFLD Glutathione Transferase (cytosolic) 68 236 IPR040079 -
Mupr18103g00001 428 Gene3D - 260 325 IPR036388 -
Mupr18103g00001 428 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 54 259 IPR044627 GO:0033355|GO:0045174|GO:0098869
Mupr18103g00001 428 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 60 138 IPR004045 -
Mupr18103g00001 428 FunFam HMG-Y-related protein A 257 331 - -
Mupr18103g00001 428 SUPERFAMILY GST C-terminal domain-like 133 258 IPR036282 -
Mupr18103g00001 428 PRINTS AT-hook-like domain signature 328 338 IPR017956 GO:0003677
Mupr18103g00001 428 PRINTS AT-hook-like domain signature 348 359 IPR017956 GO:0003677
Mupr18103g00001 428 PRINTS AT-hook-like domain signature 375 385 IPR017956 GO:0003677
Mupr18103g00001 428 MobiDBLite consensus disorder prediction 319 416 - -
Mupr18103g00001 428 Gene3D Glutaredoxin 54 139 - -
Mupr18103g00001 428 SFLD Main (cytGST) 68 236 - -
Mupr18103g00001 428 SUPERFAMILY Thioredoxin-like 69 136 IPR036249 -
Mupr18103g00001 428 CDD GST_C_DHAR 139 259 - -
Mupr18103g00001 428 SUPERFAMILY "Winged helix" DNA-binding domain 259 335 IPR036390 -
Mupr18103g00001 428 SMART AT_hook_2 407 419 IPR017956 GO:0003677
Mupr18103g00001 428 SMART AT_hook_2 328 340 IPR017956 GO:0003677
Mupr18103g00001 428 SMART AT_hook_2 350 362 IPR017956 GO:0003677
Mupr18103g00001 428 SMART AT_hook_2 377 389 IPR017956 GO:0003677
Mupr18103g00001 428 FunFam Glutathione S-transferase DHAR3, chloroplastic 140 262 - -
Mupr18103g00001 428 Gene3D - 140 259 - -
Mupr18103g00001 428 Pfam Glutathione S-transferase, N-terminal domain 70 138 IPR004045 -
Mupr18103g00001 428 CDD GST_N_family 71 131 - -
Mupr18103g00001 428 PRINTS High mobility group protein (HMGY) signature 352 363 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mupr18103g00001 428 PRINTS High mobility group protein (HMGY) signature 366 385 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mupr18103g00001 428 PRINTS High mobility group protein (HMGY) signature 326 338 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Mupr18103g00001 428 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 246 323 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr18103g00001 428 SMART h15plus2 245 317 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mupr18103g00001 428 Pfam linker histone H1 and H5 family 259 315 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18103g00001 Mupr-Chr18103 2973 10435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18103g00001 1 261 Glutathione S-transferase Gene Family AT5G16710 63.396 3.29e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18103g00001 K21888 - gmx:732557 456.832