Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18093g00001 ATGGGTTTTGGTAATTCAAGATCTGCAAGGTTTGAAGATGATCCGGAGCTAGCAAAATTTCCTGCAACTAACGGTGACAATGGTGTTAAGATTATATACCACATTGATGGGACACAAATAGCTGAACCTAGTTCCAAAATGGCTCAGAAAAAGGTGACGGGGAAGTTCTTGAAAGCTAGAATGTTGTCAAGAGTGTTCTCAGAAGACTACGACAGAGTAAAACGAAGAGTATTAGATCCTAGGGGACAAATCATTCACCGATGGAACAAGATTTTCTTGGTAGCATGTTTGGTATCTTTGTTTGTGGACCCTTTGTTCTTTTACCTGCCAGTGGTTCGAGATGAAGTATGCATTGATATTGGAATAACTCTTGAAGTTATCCTCACCTTGGTAAGAACAGTGGGGGATTTCTTTTACATGATTCAGATTTTGATCAAGTTTCGTACGGCTTTTGTTGCTCCTTCTTCAAGGGTTTTTGGGAGAGGAGAACTTGTTGTAGGATATTCTAAGATTGCAGTTAGGTACCTCCGCAAGGGTTTCTGGTTAGACTTTGTTGCTGCCCTGCCCCTTCCTCAGGTGTTAATTTGGATTATTATCCCAACTCTTAGGGGTTCAACCATGGCAAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATTTTCCGAGGCTACTTTTGATTTTTCCACTTTCATCACAAATTGTAAAAGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACCTGATGCTTTACATGTTGGCTAGCCATGGGCTTGCTGGTACCTTCTATCAATCGAACGACAGGAAGCATGCTGGAGAAGTGTATGTGATTTGGAGAAGTCATTTTGTCAACAAGGATTCTTTGACTGCCACAGGGTTAAAGATGCCCTCAGGACCTCCTGGTTTATGGCAATTTGGTATATATGCTGATGCCGTGACTTCCCAAGTAACATCCTCGGCATTCTTCAATAAGTACTTCTTTTGCCTGTGGTGGGGCCTAAGGAATCTGAGTTCTTTGGGACAAGGCCTTCTTACTAGCACATACGTTGGAGAAATAATGGTCGCCATTATTATTGCAACCCTCGGATTGGTTCTCTTTGCGTTGCTAATTGGTAATATGCAGACATACCTCCAATCAACGACTGTTCGGTTAGAAGAGTGGAGGGTGAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCTAGAACTAAGAGAATCTGTGCGTAAATATGATCAATACAAATGGCTGGCTACACGAGGAGTAGATGAAGAAGCGCTTCTCCAAGGACTTCCCCTGGATCTTCGCAGAGACATCAAGCGTCACCTGTGTCTTGATCTAGTCCGAGGAGTGCCATTATTTGATCAAATGGATGAGAGAATGCTGGACGCAATATGTGAAAGGTTAAAGCCTGCATTGTGCACAGAAGGGACGTTTCTTGTCCGCGAGGGTGATCCTGTGAACGAGATGCTGTTCATAATCCGAGGTCATCTTGATTCATACACCACCAATGGAGGCCGGGCTGGATTCTTCAACTCATGCCGTATTGGGCCAGGTGATTTCTGTGGTGAGGAGCTCCTTACTTGGGCCTTGGACCCACGGCCCAGTGTCATACTCCCTTACTCCACTCGAACAGTGAAAGCCATCTCTGAAGTTGAAGCCTTTGCACTCATAGCCGAAGACCTCAAGTTTGTTGCCTCACAGTTTAGAAGACTACACAGCAAACAACTGAGACATAAATTCAGGTTTTACTCGCACCAGTGGAGAACGTGGGCCGCGTGTTTCATTCAAGCCGCGTGGAGAAGGCATAAGAAAAGGAAGGAAGTTGCTGAACTAAAGGCGAGGGCAATGCATGCTGAGCCTGAAACCCCAACTTATGCAAAAAGGGTGTCAAGGAGCACTAGGAAAGGTGACATTGTTAATATGCACTCTCCGACAGATTCTGGAGTTGTCACCTCTTTGCAGAAGCCTGCAGAACCAGACTTCTCTGTTGATGAA 2028 0.4453 MGFGNSRSARFEDDPELAKFPATNGDNGVKIIYHIDGTQIAEPSSKMAQKKVTGKFLKARMLSRVFSEDYDRVKRRVLDPRGQIIHRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGITLEVILTLVRTVGDFFYMIQILIKFRTAFVAPSSRVFGRGELVVGYSKIAVRYLRKGFWLDFVAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYFPRLLLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHGLAGTFYQSNDRKHAGEVYVIWRSHFVNKDSLTATGLKMPSGPPGLWQFGIYADAVTSQVTSSAFFNKYFFCLWWGLRNLSSLGQGLLTSTYVGEIMVAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPLELRESVRKYDQYKWLATRGVDEEALLQGLPLDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPYSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEVAELKARAMHAEPETPTYAKRVSRSTRKGDIVNMHSPTDSGVVTSLQKPAEPDFSVDE 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18093g00001 676 MobiDBLite consensus disorder prediction 631 676 - -
Mupr18093g00001 676 FunFam Cyclic nucleotide-gated ion channel 1 461 579 - -
Mupr18093g00001 676 CDD CAP_ED 463 594 IPR000595 -
Mupr18093g00001 676 MobiDBLite consensus disorder prediction 647 663 - -
Mupr18093g00001 676 ProSiteProfiles IQ motif profile. 599 628 IPR000048 GO:0005515
Mupr18093g00001 676 SUPERFAMILY cAMP-binding domain-like 393 589 IPR018490 -
Mupr18093g00001 676 ProSiteProfiles cAMP/cGMP binding motif profile. 463 560 IPR000595 -
Mupr18093g00001 676 SMART cnmp_10 463 594 IPR000595 -
Mupr18093g00001 676 FunFam Cyclic nucleotide-gated ion channel 1 390 454 - -
Mupr18093g00001 676 Gene3D Helix hairpin bin 390 454 - -
Mupr18093g00001 676 Pfam Ion transport protein 88 390 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr18093g00001 676 SUPERFAMILY Voltage-gated potassium channels 79 385 - -
Mupr18093g00001 676 Gene3D Jelly Rolls 461 581 IPR014710 -
Mupr18093g00001 676 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 672 - -
Mupr18093g00001 676 Gene3D - 90 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18093g00001 Mupr-Chr18093 4999 8133 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18093g00001 54 675 Ion Channels AT2G28260 72.671 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18093g00001 K05391 - gmx:100811847 1124