Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18090g00001 ATGGAAGATGAAAACCACAGCAATTTGCCAAATGGGCTCATCTCAGGAAGCCCCGAAAATCCCTGCTTAAAGACCCACAACAATAACACCAACGTTAACAAAGAACAAGATCGCTTTCTCCCTATAGCCAACGTGGGAAGAATAATGAAAAAAGCCATCCCCGGCAACGGCAAAATCTCTAAGGATGCAAAAGAGACAGTTCAAGAATGCGTGTCGGAGTTCATCAGCTTTGTCACGGGGGAAGCCTCTGACAAATGTCAACGAGAAAAAAGGAAGACAATCAACGGTGATGATATCATTTGGGCCATCACCACCTTAGGATTTGAGGACTATGTGGACCCATTAAAATCTTATCTCCAGAAATATAAAGAGATAGAAGGAGAGAAGCTTAATATTCCTAAGCAACAACGTTCTGAACAAAGGCTACAGCAGCAACATCATCCTCATCAAGACCAATGTAGTGTATATTCCTCACCAAACCTCATTTCTCAGCCTCCCTATGTTTCCACTGATCAGCTATTTTCCCTACCATTCTCCCCAAATTCCATTCAGAAACAGTTACAACCGCAAGACCAGATCGATTCAGTGGGGCAATGGCGAATGCTCAAGAGTTTTTTGAATAAGAACTGA 630 0.427 MEDENHSNLPNGLISGSPENPCLKTHNNNTNVNKEQDRFLPIANVGRIMKKAIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVDPLKSYLQKYKEIEGEKLNIPKQQRSEQRLQQQHHPHQDQCSVYSSPNLISQPPYVSTDQLFSLPFSPNSIQKQLQPQDQIDSVGQWRMLKSFLNKN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18090g00001 209 ProSitePatterns NF-YB/HAP3 subunit signature. 70 86 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mupr18090g00001 209 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 39 103 IPR003958 -
Mupr18090g00001 209 MobiDBLite consensus disorder prediction 1 31 - -
Mupr18090g00001 209 Gene3D Histone, subunit A 26 156 IPR009072 GO:0046982
Mupr18090g00001 209 PRINTS CCAAT-binding transcription factor subunit A signature 86 104 - -
Mupr18090g00001 209 PRINTS CCAAT-binding transcription factor subunit A signature 67 85 - -
Mupr18090g00001 209 PRINTS CCAAT-binding transcription factor subunit A signature 105 123 - -
Mupr18090g00001 209 MobiDBLite consensus disorder prediction 8 31 - -
Mupr18090g00001 209 FunFam Nuclear transcription factor Y subunit B-3 28 152 - -
Mupr18090g00001 209 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 26 150 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mupr18090g00001 209 MobiDBLite consensus disorder prediction 135 155 - -
Mupr18090g00001 209 SUPERFAMILY Histone-fold 36 153 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18090g00001 Mupr-Chr18090 1467 2979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18090g00001 12 199 CCAAT-HAP3 Transcription Factor Family AT2G13570 62.136 1.05e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mupr18090g00001 CBFD_NFYB_HMF 6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18090g00001 K08065 - gmx:100780647 317.775