Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18072g00001 ATGAATAAGGAGGATAGGAGTAAATACCTGGCCCGAATTCTTAATGCCTGCGCCAATTTTATTGAATCAGGCAGCATCATGAACGCAGATACTGGACTGGATTATGTTGCACACATTGCTTCCCCTTATGGTGATGCAATGCAAAGGGTAGCCACCTATATTAGTGAGGGTCTAGCTTGCCAAATTCTAAAAAATTTGCATGGAGTACCTAAAGCTCTCAGATTATCAAAAACAATGTCAACCTCAGAAGAAGAACTTGTTAAGAAGTTATTCTTTGATCTGTATCCATTTTTAAAGATTGCATATGTGATCACAAGTCATGCCATTGCTGAGGCTATGGAAGGGGAAGAAGTGATCCATGTTGTTGATCTCAGTGCATCTGATGCTACTCAGTGGATATGGCTTATGCAGAGATTAAAAGAAAGCCAAAAGAAACCTAAATTTCTGAAAATAACAGGCATACATGAGAAGAAGGAAATTTTAGAGGAAGTGTTCACTCACTTGAGAGTAGAAGCTGATAAGTTGAATTTCCATCTCGAACTCCATGCTGTTGTAAGCACATTGGAAAATCTTGACCTTGAAGGATTGCCTGTGAAGATAGGAGAGCCTCTTGCAATCAGCTCAGTACTTCAGCTGCACACTCTTCTGGCCACTGATGATGCAATGGTCTGCATCAGGAGCTCACCGGCAGAATCATCGCATCAAAGGACATTTGCTGAGATGCTTGGGAAACAAAAGACTATCCCCACTTCTGATACTTCAACCAAGATTATGCACTTCCTAATTAACCTGTGGAAACTCCAACCTAGAGTGATGGTGATTACTGAACAAGAATCTAATGTTAATGGTTCTACTTTGACAGAAAGGGTTGACAAAGCACTGGACTTTTATGGTGCTTTGTTCAACTGCTTGGAAGCAACTGTTTCAACAACACTAGTGGAGAGAATCATAATGGAAAGGACTCTACTAGGGGAAGAAATAAAGAACATCGTTGCATGTGAAGGAGTTGAGAGAAAGGAGAGGCATGAGAAACTTGAGACTTGGATCCCAAGGCTAGAATTGGCTAGGTTTGGGAAGGGACATATTAGCCATCATGATGCCTTTGTAGCATTTCCTCAAACAGCTGATGACCGTGCAAAAATGATGACAACAAACATATATGAAAAACTA 1170 0.4068 MNKEDRSKYLARILNACANFIESGSIMNADTGLDYVAHIASPYGDAMQRVATYISEGLACQILKNLHGVPKALRLSKTMSTSEEELVKKLFFDLYPFLKIAYVITSHAIAEAMEGEEVIHVVDLSASDATQWIWLMQRLKESQKKPKFLKITGIHEKKEILEEVFTHLRVEADKLNFHLELHAVVSTLENLDLEGLPVKIGEPLAISSVLQLHTLLATDDAMVCIRSSPAESSHQRTFAEMLGKQKTIPTSDTSTKIMHFLINLWKLQPRVMVITEQESNVNGSTLTERVDKALDFYGALFNCLEATVSTTLVERIIMERTLLGEEIKNIVACEGVERKERHEKLETWIPRLELARFGKGHISHHDAFVAFPQTADDRAKMMTTNIYEKL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18072g00001 390 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 366 IPR005202 -
Mupr18072g00001 390 ProSiteProfiles GRAS family profile. 1 390 IPR005202 -
Mupr18072g00001 390 Pfam GRAS domain family 11 365 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18072g00001 Mupr-Chr18072 2582 5598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18072g00001 1 365 GRAS Transcription Factor Family AT1G50420 43.766 8.29e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr18072g00001 GRAS 2.7e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18072g00001 - - vra:106778126 392.119