Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18061g00001 ATGGGTTCGGTTCCTGCAGAACTGAGCTTGGATTTAAGACCAACCTTTGTTCCCAAAACCATCACTGATTTCCTCTGCGACCTCTCATCCGTCCCAGACAAGCTGGCCAGCCTCCACGATTTCCTTGCTCGATTGGAGGACGAGCTCCGCAAGATCGACGCCTTCAAGCGCGAGCTCCCTCTCTCCATGCTCCTCTTAAACGACGGTTCGTGTTCCTGTTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTCTTTTCTTCCTTCCCCTCTCTTCCTTCTCTTTTCTTCCTCCAAATTCACCCTCCTTCTCTCTCTCCCCCAGCTATTTCACTTCTCAGGACGGAATCGCAAAAATGCAGGCCTCGTGATTCTCCCCCACTCTTTGAGGAGTTCATTCCCCTCAAGAAAGAGCATCTTCACAACGACGAAACTAATAGCAAGGATAACGAATGCAGCAGGGATAAGAGGAATTGGATGAGTTCTGTTCAGCTCTGGAATAACACTACCACTAACAATAATGCCTCTGATCGGATTCAACTACATCATAAATTAGAAACCAAGAAAAGTGAAGAAGGTCAATCTGTGGCTGAAGATCTTTTTCAGTCTTGTAATAATAGAAATGGAGGGAGAAGGGCGTTTATGCCTTTTTCTAGGTACTCTTCTTGTTCCTCTTCTGTGCCTGTGACAACAGTGGCACTGGCGGCTGCAACCAAAGAAGAAAAGGAAGAGAGTGTTATGAATAGGCTATCTCTTCTGACCCCTTCTGTGAAAGAGGGATGTGGTTCAAGGGGATCAAGAAGCAGTTCCAACAGGGCTGTTTCTTCTTCTTCCCCTCCTACGGTACAGCCCAGTTTGCGGGGAACGCCGCTTCAGCAAAGTTCTAGGAAACAGAGGAGATGCTGGTCCCCTGAGTTGCACAGACGATTTGTTAATGCCTTGCAAAAGCTAGGAGGTTCTCAAGCAGCAACACCAAAGCAAATTAGAGAGCTCATGCAGGTTGATGGCCTGACTAATGATGAAGTGAAGAGCCATTTACAAAAATACCGACTTCATACACGGAGAGTTCCATCTGCAACCGCTAATCAACAAGTTGTGGTTCTTGGAGGTTTGTGGATGTCTCAAGATCAGTACAATGACTCATCAAAGGTTAGCAGTTCGGGGTCAGGTTCTCCTCAAAGTCCCCTTCATTTGGCTGCAGGGTCCCGAGGAGGGACATCCCCAACTGAGGGTGACAGCATGGAAGATGACGAAGATGCAAGATCCGAGAGTTATAGTTGGAAAAGTCATATGAACAAACCTGGAAAAGTTGATGTATAG 1317 0.4677 MGSVPAELSLDLRPTFVPKTITDFLCDLSSVPDKLASLHDFLARLEDELRKIDAFKRELPLSMLLLNDGSCSCSFPFLSFPFLFFSSFPSLPSLFFLQIHPPSLSPPAISLLRTESQKCRPRDSPPLFEEFIPLKKEHLHNDETNSKDNECSRDKRNWMSSVQLWNNTTTNNNASDRIQLHHKLETKKSEEGQSVAEDLFQSCNNRNGGRRAFMPFSRYSSCSSSVPVTTVALAAATKEEKEESVMNRLSLLTPSVKEGCGSRGSRSSSNRAVSSSSPPTVQPSLRGTPLQQSSRKQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPSATANQQVVVLGGLWMSQDQYNDSSKVSSSGSGSPQSPLHLAAGSRGGTSPTEGDSMEDDEDARSESYSWKSHMNKPGKVDV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18061g00001 438 FunFam Myb family transcription factor 295 353 - -
Mupr18061g00001 438 SUPERFAMILY Homeodomain-like 294 354 IPR009057 -
Mupr18061g00001 438 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 428 IPR044787 GO:0003700|GO:0006355
Mupr18061g00001 438 MobiDBLite consensus disorder prediction 255 299 - -
Mupr18061g00001 438 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 293 353 IPR017930 -
Mupr18061g00001 438 Pfam Myb-like DNA-binding domain 298 349 IPR001005 -
Mupr18061g00001 438 NCBIfam myb-like DNA-binding domain, SHAQKYF class 296 351 IPR006447 GO:0003677
Mupr18061g00001 438 Gene3D - 295 353 - -
Mupr18061g00001 438 MobiDBLite consensus disorder prediction 377 438 - -
Mupr18061g00001 438 Coils Coil 38 58 - -
Mupr18061g00001 438 MobiDBLite consensus disorder prediction 377 395 - -
Mupr18061g00001 438 MobiDBLite consensus disorder prediction 260 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18061g00001 Mupr-Chr18061 6622 8724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18061g00001 6 372 G2-like Transcription Factor Family AT2G03500 37.008 1.26e-51 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr18061g00001 Myb_DNA-binding 4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18061g00001 - - gmx:100806237 561.607