Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18056g00002 ATGCTAACTCAGCAGTCCAAATCATCCATGGAAGAATTTTCCTCTCTGCTTGAAGGTCAAACAAGCATGGAACCAACCATTTCAACTACTCAAGAAGGTGTGTCAAGGGATTGGACTCAAGAGTCAGTAATACCCCAACACCAACTGACTCCACAAATTGGAACCTCTTCTCAAGGCTCTGTCAACAACAATTTCACCAATTTTTCAACCCAGCAATGTGACATCTTATCCGTCTTAGAGGCAACACTAGACGAAAGACATATAGAAGACAGTCTAGTCCGATCCAAGTTATTGTCGCACCAACTTGGGCCCCATACAATGAATGATAGGGAACCAAATAATCGTAGAGAGAATGATCAAAGACAGCATGGGGGGCATCGGAATTTGAGTGGCAAAACAATTGGTAACAAGAGCTCTTTATATCGAGGAGTAATCAAGTGCAACGAACAGCGTTTCGAAGCATTTGTGTGGGATAACACCGATCCGGGGGACAAAGGAAGAATTGGTGGTTATTGGACTGAAATCGACGCCGCCAGAGCGCACGATCTGTTGTCAATTAAGATGGGCGGTTTAACAACATTAACAAATTTTCCCGTGAGATGCTATTCAACAGAAATGGACGAAATGCAAAGCATGAATAAAATGGATTATATACATGCTGTTAGAAGTACCTTGTAA 678 0.4233 MLTQQSKSSMEEFSSLLEGQTSMEPTISTTQEGVSRDWTQESVIPQHQLTPQIGTSSQGSVNNNFTNFSTQQCDILSVLEATLDERHIEDSLVRSKLLSHQLGPHTMNDREPNNRRENDQRQHGGHRNLSGKTIGNKSSLYRGVIKCNEQRFEAFVWDNTDPGDKGRIGGYWTEIDAARAHDLLSIKMGGLTTLTNFPVRCYSTEMDEMQSMNKMDYIHAVRSTL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18056g00002 225 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 94 222 - -
Mupr18056g00002 225 ProSiteProfiles AP2/ERF domain profile. 140 198 IPR001471 GO:0003700|GO:0006355
Mupr18056g00002 225 Gene3D AP2/ERF domain 140 200 IPR036955 GO:0003700|GO:0006355
Mupr18056g00002 225 MobiDBLite consensus disorder prediction 99 133 - -
Mupr18056g00002 225 SMART rav1_2 140 204 IPR001471 GO:0003700|GO:0006355
Mupr18056g00002 225 SUPERFAMILY DNA-binding domain 139 199 IPR016177 GO:0003677
Mupr18056g00002 225 MobiDBLite consensus disorder prediction 109 126 - -
Mupr18056g00002 225 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18056g00002 Mupr-Chr18056 3988 5326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18056g00002 132 222 AP2-EREBP Transcription Factor Family AT5G65510 43.434 1.22e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18056g00002 K09285 - pvu:PHAVU_001G137500g 227.639