Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18054g00002 ATGGCAAAATCTCCAGAAACTGAACTCCCTCTAAAAGCTTTTGGCTGGGCCGCTAGAGACACTTCTGGCACCCTTTCCCCCTTTCATTTTTCCAGAAGGGAAAACGGCGACGATGACGTGTCTCTCCAGATTCTCTTTTGTGGAGTTTGCCATTCTGATCTCCACACTGCCAAAAACGACTGGGGTTTCACCACTTACCCTGTCGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAAATATTGGAAATAATGTGAAAAATTTCAAAGTGGGTGATAAAGTTGGAGTTGGTGTGATGGTGGAATCTTGTAAGGAATGTGAAAATTGCCAACAGGATCTAGAGAGTTACTGTCCCAAAGTTGTGTTTACCTATAACTCTGGTTATCAAGGGACACGAACTCAAGGTGGTTATTCTAATTTCGTGGTTGTTCACCAGCGTTATGTGCTCCGATTTCCTGAGAACTTACCCCTTGATGCTGGTGCTCCACTGCTGTGTGCTGGGATCACTGTGTATAGCCCAATGAAATATTATGGGATGACAGAGCCAGGGAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAGTCAAATTTGCTAAGGCCTTTGGGCTGAAAGTTACTGTCATTAGTGGCTCTCCAAGCAAGGAAGCTGAGGCCATTGACAAGCTTGGGGCTGATTTTTTCCTTCTTTCCTCAGACCCGGCAAAAATGAAGCTATCATCAAATGCTAGTGAGTTACTGGCAAGAGCTGAATACCGTAGAGAAACTGCTATGGGAACCATGGACTATATCATAGACACAATTTCCGCTGTTCATTCCCTGGTTCCACTGCTTGGTCTGCTGAAGCTGAATGGGAAGCTGGTTACTGTAGGATTGCCTAGCAAACCCCTTGAGCTTCCTATCTTTCCGATAGTTGCAGGACGAAAGCTTGTAGGGGGGAGCAACTTTGGTGGGATCAAGGAAACTCAGGAAATGCTTAATTTTTGCGGAAAGCACAACATAACTGCAGATATTGAGCTGATTAAGATGGACCAAATCAACACAGCCATGGAAAGGCTTAGCAAATCTGATGTGAAATATCGCTTTGTGATTGATGTGGCCAACTCCTTCTCAAGTTTGTAG 1131 0.4518 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSLQILFCGVCHSDLHTAKNDWGFTTYPVVPGHEIVGVVTNIGNNVKNFKVGDKVGVGVMVESCKECENCQQDLESYCPKVVFTYNSGYQGTRTQGGYSNFVVVHQRYVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKFAKAFGLKVTVISGSPSKEAEAIDKLGADFFLLSSDPAKMKLSSNASELLARAEYRRETAMGTMDYIIDTISAVHSLVPLLGLLKLNGKLVTVGLPSKPLELPIFPIVAGRKLVGGSNFGGIKETQEMLNFCGKHNITADIELIKMDQINTAMERLSKSDVKYRFVIDVANSFSSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18054g00002 376 FunFam Cinnamyl alcohol dehydrogenase 166 339 - -
Mupr18054g00002 376 Pfam Alcohol dehydrogenase GroES-like domain 38 149 IPR013154 -
Mupr18054g00002 376 SUPERFAMILY GroES-like 20 184 IPR011032 -
Mupr18054g00002 376 Gene3D - 16 369 - -
Mupr18054g00002 376 Pfam Zinc-binding dehydrogenase 193 331 IPR013149 -
Mupr18054g00002 376 PANTHER ALDEHYDE REDUCTASE 5 372 IPR047109 GO:0016616
Mupr18054g00002 376 FunFam Putative cinnamyl alcohol dehydrogenase 6 340 369 - -
Mupr18054g00002 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 337 IPR036291 -
Mupr18054g00002 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Mupr18054g00002 376 FunFam probable cinnamyl alcohol dehydrogenase 16 174 - -
Mupr18054g00002 376 CDD CAD1 14 368 IPR047109 GO:0016616
Mupr18054g00002 376 Gene3D - 166 339 - -
Mupr18054g00002 376 SMART PKS_ER_names_mod 23 367 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18054g00002 Mupr-Chr18054 12428 15471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18054g00002 12 373 Monolignol Biosynthesis Gene Families AT2G21730 67.671 4.42e-177 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18054g00002 K00083 - gmx:100819684 593.193