Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18048g00001 ATGGGCATCCGCACGGACTGCCCTGCACCTGCACCTGCACCTGCACCACTGTTGATGAATTTTGATCATGATCGTGCTTGTAGGATTCTTCTCCTCCTCCTCCTCCTTTTTCCACCGGTCACGGCACAGTTCCAAAGCTCGCCGCCGCCGCCGGATCCTTTCGCCAGGTTAAGGTTCGATAAGACCATGGCCATTGTTTTGGTAATCCTCGTCGTGGTTTTCTTCGCGTTGGGCTTCGTGTCTATCTACACACGCCAATGCGCGGAGCGGAGGGTCCGAGGGAGGCTCGACCTCGCCGTGGCGATCGCCGGTGGCATCGAGCGCCGGCCACAGCACGGCCTCGACGCGGCGATAGTGGACACATTCCCGACATTCGTGTACTCCGAGGTTAAGGCATTGAAGATCGGAAGGGCCACGCTGGAATGCGCTGTGTGTCTCAACGAGTTCAAAGACGACGAAACGCTGCGTTTGATTCCAAAATGCTGCCACGTGTTCCACCCGGACTGTATCGATGCGTGGCTGGCGAATCACTCCACGTGCCCCGTGTGCCGTGCCAACCTCGCGCCCAAGCCCGAGGACGACACGCCTTCTAACGTCGAGATTCAGATTCCGGATAGTGCCCGGCCCAATGGGCCCAATGCGGAGCCCGATTATGATCCTAATTACATTAACCCGGTCGACGAGGGTGAAGGTGAACGAAACAGAATAGTAATAATTACTGAGCCTGCTAGTGTTAATTTAGACGATCCGAACCATCCGGTTCGGTCGCGGTCAAGCGGGTTCGGGATTGCGAGGCTGTTTCCGCGTTCTCACTCGACGGGTCACTCGCTGGTTCGACCGGGCGAGGACCGGGAACGGTTCACGCTGCGGTTGCCGGAGGAGGTGCGGAACCGGCTCGTGAGTTCGGCGACACTGAACCGGACGAAGAGTTGCGGGGTGACGTGGCAGCGAGAGAGCAGTGGGAGAAGGGGTTACAGGACGAGGAGCGTGGGGAGGAGCTACCTGCAGTACGAGCGGTTCGGTGGGGAGGGCCGGTTGGATCGGTGGGGGTTCATGTGGACCTCACCGTTTTGGGGTAGGACCGGTTCGGTGAGATCACCTAAGGGAATGAGGGTGAAAGATGAAATCGACGTGGGAGAACGTTCCTCTGATCGTTTATTTTCCAAGGAATGA 1173 0.5814 MGIRTDCPAPAPAPAPLLMNFDHDRACRILLLLLLLFPPVTAQFQSSPPPPDPFARLRFDKTMAIVLVILVVVFFALGFVSIYTRQCAERRVRGRLDLAVAIAGGIERRPQHGLDAAIVDTFPTFVYSEVKALKIGRATLECAVCLNEFKDDETLRLIPKCCHVFHPDCIDAWLANHSTCPVCRANLAPKPEDDTPSNVEIQIPDSARPNGPNAEPDYDPNYINPVDEGEGERNRIVIITEPASVNLDDPNHPVRSRSSGFGIARLFPRSHSTGHSLVRPGEDRERFTLRLPEEVRNRLVSSATLNRTKSCGVTWQRESSGRRGYRTRSVGRSYLQYERFGGEGRLDRWGFMWTSPFWGRTGSVRSPKGMRVKDEIDVGERSSDRLFSKE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18048g00001 390 MobiDBLite consensus disorder prediction 188 218 - -
Mupr18048g00001 390 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 190 IPR013083 -
Mupr18048g00001 390 Pfam Ring finger domain 141 184 IPR001841 -
Mupr18048g00001 390 SUPERFAMILY RING/U-box 126 192 - -
Mupr18048g00001 390 CDD RING-H2_EL5-like 141 184 - -
Mupr18048g00001 390 FunFam E3 ubiquitin-protein ligase ATL6 103 190 - -
Mupr18048g00001 390 SMART ring_2 142 183 IPR001841 -
Mupr18048g00001 390 PANTHER RING FINGER DOMAIN-CONTAINING 43 192 - -
Mupr18048g00001 390 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18048g00001 Mupr-Chr18048 2632 3804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18048g00001 30 374 Rapid Response to Elicitors AT3G05200 39.481 4.15e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18048g00001 K10664 - gmx:100815982 584.334