Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr18019g00001 ATGGGTAGAACTCCTTGCTGCAACAAAGAGCAAACACACAAAGGAACTTGGTCCAAAGAGGAAGACGAATGCCTCATCAAGTATATCAACCTTCATGGGGAAGGCAAATGGAGAACCCTTCCCAAAGCCGCAGGCTTGCTTCGATGCGGCAAAAGTTGCAGACTCAGATGGATGAATTACCTGAGACCCAATATCAAGAGAGGGGACTTCACTAAAGAAGACGATGACCTCATCATTCACCTCCATAGCTCACTTGGGAACAAATGGTCTCAAATAGCTTCAAATCTACCTGGAAGAACAGATAATGAGATCAAGAACTACTGGAACACCCACCTCAAGCGTCAACTTTATCTCCTTAGAATGACCCCTCTAGAGGACGCCGCAACATCAAAAGTTGCTTTTGCCACCGTCATAGCCGCCACCGCTACAGCGCCACCAGCTAACTCTAACGTGTCTGTGGTCACCACCACAAGCAACAAGGGAACCAAGAACAACAACACTAGCAACTTCACCGATGGTAGCACCAACCACATCTACTACTTCAATGTTTTTCTCAATTCAAAGGTGCAGATTACCGATGGTGATTATTCAGCTGGTGAAGGCTCAAATATCAGCAGTAGTGTTGCCACCACAGAGGAAGATCATGTTCATCCTCAACTCAACTTGGAGCTTTTCTTAGCTCCACCCTCTCAGCCACAAGATTCTTCCATGAACCCTGAATGGTTGAAACCACAAGAGCAACAAGAAGAGCTAGTTTTGTTCCCGGTGAATATTGGGAATGTTGTGCATGAG 792 0.4609 MGRTPCCNKEQTHKGTWSKEEDECLIKYINLHGEGKWRTLPKAAGLLRCGKSCRLRWMNYLRPNIKRGDFTKEDDDLIIHLHSSLGNKWSQIASNLPGRTDNEIKNYWNTHLKRQLYLLRMTPLEDAATSKVAFATVIAATATAPPANSNVSVVTTTSNKGTKNNNTSNFTDGSTNHIYYFNVFLNSKVQITDGDYSAGEGSNISSSVATTEEDHVHPQLNLELFLAPPSQPQDSSMNPEWLKPQEQQEELVLFPVNIGNVVHE 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr18019g00001 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr18019g00001 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr18019g00001 264 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr18019g00001 264 CDD SANT 16 61 IPR001005 -
Mupr18019g00001 264 Gene3D - 14 66 - -
Mupr18019g00001 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 197 - -
Mupr18019g00001 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr18019g00001 264 CDD SANT 70 112 IPR001005 -
Mupr18019g00001 264 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mupr18019g00001 264 FunFam MYB-related transcription factor 13 66 - -
Mupr18019g00001 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr18019g00001 264 Gene3D - 69 115 - -
Mupr18019g00001 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr18019g00001 264 SMART sant 66 114 IPR001005 -
Mupr18019g00001 264 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr18019g00001 Mupr-Chr18019 350 1674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr18019g00001 1 233 MYB Transcription Factor Family AT2G16720 47.639 2.37e-66 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr18019g00001 Myb_DNA-binding 3.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr18019g00001 K09422 - gmx:778033 264.618