Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1799g00003 ATGGAGATCTTAAATCCTGCCAAAGGTAAGACCTACAAGCTCCCAGTTGGGTACAGGTTCGATCCTGCCGATGATGTTCTTGCTGGTTACTACCTGAGGAAGAAGATGTTAACTCAACCACTTCCCAATGACCTCATCCAAGACTGTGATGTCTTCCAAACTGAGCCTTGGGGGCTGCCAGGAGGTGGAAAGCATTTGAACTGGCAGAGGTTTTTCTTCTATGATACAAGGACCCGTGTGTTTGAAAACATTGACAAAAGAGATGCTGGGAATGGGCAATGGAGAGTAGTGGAGAAACTGCAAGATGTTGAGCTGACTAGCAAGCAAGTGATTGCAAAGAGGAACGTTCTGGTTTTCTGGGAAGCCAATGGCAACAGTTTTGCCAAAACAAATTGGGTGATGCATGAATTTCGCCTTGCTCCAAAATCAAATCAATCTCTGATGTCAGCCATGGCTGTGTACCGCATATTCGAGATGAAGCAGGTGAGAAAGAGGAAGAAGGCAAGAGCGTCTAAAGCAGTGGCCTCAAACAGCAGTGATGCTGGAGAAGTTGTTGATCCCATTGTCATTGATTTCACATTGGAGAATGGCAGTGTGTCTGGTCCTCCCTCTCCTCGATACCCTATGGGCGAGCATACAAACCTCACCACGAGGATGGTAGTGCCTAAGGTTTTGATGGCATCTGCACATGGATTTGATTCGCATCCTTCTTTCCATAGAACTCAATACTCCATTTACGAAATTCTTTCTTTCACGTTAAGGAGGAAAAGATTATTCTTCTTGGTGGAAGTCAGGATATAA 801 0.4519 MEILNPAKGKTYKLPVGYRFDPADDVLAGYYLRKKMLTQPLPNDLIQDCDVFQTEPWGLPGGGKHLNWQRFFFYDTRTRVFENIDKRDAGNGQWRVVEKLQDVELTSKQVIAKRNVLVFWEANGNSFAKTNWVMHEFRLAPKSNQSLMSAMAVYRIFEMKQVRKRKKARASKAVASNSSDAGEVVDPIVIDFTLENGSVSGPPSPRYPMGEHTNLTTRMVVPKVLMASAHGFDSHPSFHRTQYSIYEILSFTLRRKRLFFLVEVRI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1799g00003 266 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Mupr1799g00003 266 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mupr1799g00003 266 PANTHER NAC TRANSCRIPTION FACTOR 56 14 176 - -
Mupr1799g00003 266 SUPERFAMILY NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Mupr1799g00003 266 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1799g00003 Mupr-Chr1799 14712 16518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1799g00003 14 178 NAC Transcription Factor Family AT1G54330 32.558 6.53e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr1799g00003 NAM 7.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1799g00003 - - gmx:100305869 297.36