Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17996g00001 ATGTGTGGTGGAGCAATCATCGCGGAGTTCATCCCTAAACACCGTTCACGCAGCCCCAAAGCGTCCGAACTCTGGCCCAACGAATCGCACCTCCAACTACCAGAGTCGTCACCGCAACCTCCCCCAGCGAAGAGGCAGAGGAAAAACCTCTACCGAGGGATCAGGCAGAGGCCCTGGGGCAAATGGGCCGCGGAGATTCGCGACCCAACAAAAGGGGTCCGTGTCTGGCTCGGTACCTTCAACACCGCCGAAGAAGCCGCTAGGGCCTACGACAGAGAAGCCCGAAAAATCCGCGGCAAAAAGGCCAAAGTCAACTTCCCCAACGAGGACGACCACTACTCCACGCAAGTTCCTGCTGATCCAGTACCGCCCCTCTATCAACAGCAATACGGATCCAAGAGTCTGAACTTGGAGTTCGGTTACGATCTGAACCAAACGGGTGTGTTCCCTTCTCAGGGTGCTATCAACACGGATCCAGTGTTTGGTTCTTCTGATGAGAATTGCGGGTACGAGAACTACATGGGGTTTTATGAGATTCCTTACTTCGACGCCCAATCAGCTCCGCAAAACGTGGTTGGGGATTTTTGGACCTTCGATGCTCCTGAGCCTGAGGCCTCTCCATCTCTCTGA 630 0.5492 MCGGAIIAEFIPKHRSRSPKASELWPNESHLQLPESSPQPPPAKRQRKNLYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDHYSTQVPADPVPPLYQQQYGSKSLNLEFGYDLNQTGVFPSQGAINTDPVFGSSDENCGYENYMGFYEIPYFDAQSAPQNVVGDFWTFDAPEPEASPSL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17996g00001 209 FunFam Ethylene-responsive transcription factor 2 49 108 - -
Mupr17996g00001 209 MobiDBLite consensus disorder prediction 17 47 - -
Mupr17996g00001 209 Gene3D AP2/ERF domain 50 108 IPR036955 GO:0003700|GO:0006355
Mupr17996g00001 209 PANTHER DNA-BINDING DOMAIN 36 118 IPR044808 GO:0003700|GO:0009873
Mupr17996g00001 209 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Mupr17996g00001 209 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Mupr17996g00001 209 Pfam AP2 domain 51 99 IPR001471 GO:0003700|GO:0006355
Mupr17996g00001 209 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Mupr17996g00001 209 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Mupr17996g00001 209 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Mupr17996g00001 209 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17996g00001 Mupr-Chr17996 3730 4441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17996g00001 1 198 AP2-EREBP Transcription Factor Family AT2G47520 46.766 6.54e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr17996g00001 AP2 5.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17996g00001 K09286 - gmx:100527371 244.588