Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1798g00001 ATGGGGAAGAAACGAACAAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCCTCTTCTAAGGACCCGCCCCACGATAACAAGAAAAACCACAGGGAAGAGCTCTGGCGGCATGAGGCGCCAGAGGAGGTGTCTGTTGAGCATTTTCCTGCGGAGAGTTCTCCAGATGTTACCAATGAGGGGAGTGCCACGTCAACACCGGTGACTGAGGATAGAAATCATGCCATTGCCTTTGCGGCAGCAACTGCAGCCGCTGCCGAGGCTGCAGTGGCAGCTGCTCAAGCAGCCGCCAGAGTTGTGAGATTGGCAGGTTATGGACGCCAGTCAAAGGAAGAAAGAGCTGCAACACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTAGTGAGGGGACATAATGTGCGAAAGCAAGCGCAGATGACAATGAGATGCATGCATGCATTGGTCCGAGTACAGGCAAGAGTTAGAGCTCGCAGACTCCAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTGAGGAGCAGGTTGAAAGAGAACAAGTAGGGGAAGAGGAACCTAAGCTTTTGAGCCCCATCAAAATGTTAGATATGGATGGTTGGGACAGTAGACGCCAAAGTAGGAAGCAGATTAAGGAAAATGATTTGAGGAAGCATGAAGCTGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCACCAGCAGAAGCAGTATATACAGATAGACCCAAATGGTGACGATATTGGAAGCTATACCAATGAGAGTGAAAGAGCTCAATTGGATTGGAACTGGTTGGAACGTTGGATGGCATCACAATCAAACAACTTGAGCAACTTTGGGCCACGTGACACCCTTTATAGGACTCTTGCTACTACTTCAACCACTGATGACATGTCTGAAGAAAAGACAGTTGAAATGGACATGGCTGCAACTCTTGACTCAACTCATGCCAACATGGGCCTCGTCAACCTAGAATCTTATGACACAAGCCCAATATCCAATAGGTATCACCAGCGCCACCACAGTGCAGGTGTACCCAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTTCGGAGTCAAGGCCCGTTTAAGCAACGGGGTTCACCTGGGCCTCACTGGAACTCGTCCACGAGGAGAAGTTCTGTTACTGGGTTGGGCTGTGACTCATCTAGCCCTGGTGGGGCCCCTGCAGCTCATGTATTCCCAAGGAGCCCAAGCCCAAAAGTTAATGAGATTCGCCTCCAATCTAAACGGATTTCCAGTGTCAGCCCAGATAATGTTGCCATTGAAGATTGGGCCCTTCCCCTTGGAGCCAATGGTTGGGCTTGA 1386 0.5036 MGKKRTSWFSSVKKVFKSSSKDPPHDNKKNHREELWRHEAPEEVSVEHFPAESSPDVTNEGSATSTPVTEDRNHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTEEKLQRRVEEQVEREQVGEEEPKLLSPIKMLDMDGWDSRRQSRKQIKENDLRKHEAAMKRERALAYAFNCQHQQKQYIQIDPNGDDIGSYTNESERAQLDWNWLERWMASQSNNLSNFGPRDTLYRTLATTSTTDDMSEEKTVEMDMAATLDSTHANMGLVNLESYDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKVRSQGPFKQRGSPGPHWNSSTRRSSVTGLGCDSSSPGGAPAAHVFPRSPSPKVNEIRLQSKRISSVSPDNVAIEDWALPLGANGWA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1798g00001 461 Pfam Protein of unknown function (DUF4005) 347 402 IPR025064 -
Mupr1798g00001 461 Coils Coil 222 242 - -
Mupr1798g00001 461 SMART iq_5 110 132 IPR000048 GO:0005515
Mupr1798g00001 461 SMART iq_5 133 154 IPR000048 GO:0005515
Mupr1798g00001 461 MobiDBLite consensus disorder prediction 388 407 - -
Mupr1798g00001 461 Gene3D - 108 162 - -
Mupr1798g00001 461 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Mupr1798g00001 461 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Mupr1798g00001 461 MobiDBLite consensus disorder prediction 18 46 - -
Mupr1798g00001 461 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Mupr1798g00001 461 MobiDBLite consensus disorder prediction 1 68 - -
Mupr1798g00001 461 Coils Coil 172 192 - -
Mupr1798g00001 461 MobiDBLite consensus disorder prediction 377 430 - -
Mupr1798g00001 461 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Mupr1798g00001 461 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1798g00001 Mupr-Chr1798 8417 11682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1798g00001 1 451 IQD Protein Family AT3G49260 49.170 5.24e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1798g00001 - - gmx:100808965 658.292