Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17969g00001 ATGCCGGGGCACCGCTCTAAGTCGGAGAAGCACGACGGCGGCGAGAAGCAGCTCCGGCGGGACCCCTACGAGGTCCTCGGCGTCTCGCGCAACTCCACGGATCAGGAAATCAAAACTGCGTACCGCAAAATGGCGCTCAAATACCACCCGGACAAGAATGCCAATGATCCTAAAGCAGCCGATATGTTTAAAGAGGTTACCTTTTCTTATAATATCCTGTCAGATCCTGACAAACGGCGTCAGTATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGATAACCAAGAGTTGGAGTTGGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCCGCAACTGTTTTGGAAGAGGCACTCAATGGTTTAGTGACCATTCGTCCACTTCCATTGGGACATTATATATCTAAAAGGGTTGAGAAGCAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGGGCTGGATTTGTTTGTCGAGTACAATCATCAGATAAAAGCAAGTTCAAGTTATTGTATTTCGATCAGGAAGACAACAGTGGTTTAAGTCTTGCCCTCCAGGAAGATAGTGCAAAAACAGGGAAGGTTACCTCTGCTGGGATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAAACAATGAACTCTATAGCTGCTGCTAAGGATCCAGATACATCATTTTTCAGAAAGCTAGATGGGTTTCAGCCCTGTGAATTAACAGAATTGAAGGCTGGTACCCATGTATTTGCTGTTTATGGCGACAACTTTTTCAAAAGTGCAAACTATACAATAGAAGCCCTGTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATTTAAGAAATATTGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCAAAGTTTGAGACAGAATATCGAGAGGTTCTGGCACAATTCTCAGAGATGACAAGCAGATATGCACATGAAATGCAAGCAATTGACGAGCTTCTGAAGCATAGAAATGAAATACATGCATCATACACTAGTGCTCCTTTAAAACGGAGTACAAGTAAGAGCAGAAGTAAAAGTTCTTCCAAGGAGGCAAAAGAAGATGGCCAAGCAAGGGAGAAAAGGAGTACAAGAGATCGGCCAAAGAAGAAGAAATGGTATAACATCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1230 0.4236 MPGHRSKSEKHDGGEKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGLVTIRPLPLGHYISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNSGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFSEEKENLRNIEAQILSKRAEISKFETEYREVLAQFSEMTSRYAHEMQAIDELLKHRNEIHASYTSAPLKRSTSKSRSKSSSKEAKEDGQAREKRSTRDRPKKKKWYNIHLRVDKRKAC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17969g00001 409 Gene3D DnaJ domain 5 104 IPR036869 -
Mupr17969g00001 409 MobiDBLite consensus disorder prediction 354 397 - -
Mupr17969g00001 409 MobiDBLite consensus disorder prediction 367 386 - -
Mupr17969g00001 409 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Mupr17969g00001 409 CDD DnaJ 21 75 IPR001623 -
Mupr17969g00001 409 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Mupr17969g00001 409 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 408 - -
Mupr17969g00001 409 Coils Coil 291 318 - -
Mupr17969g00001 409 FunFam Chaperone protein dnaJ 16 4 103 - -
Mupr17969g00001 409 SMART dnaj_3 20 78 IPR001623 -
Mupr17969g00001 409 Pfam DnaJ domain 21 83 IPR001623 -
Mupr17969g00001 409 MobiDBLite consensus disorder prediction 1 23 - -
Mupr17969g00001 409 MobiDBLite consensus disorder prediction 1 30 - -
Mupr17969g00001 409 SUPERFAMILY Chaperone J-domain 20 90 IPR036869 -
Mupr17969g00001 409 PRINTS DnaJ domain signature 41 56 IPR001623 -
Mupr17969g00001 409 PRINTS DnaJ domain signature 58 78 IPR001623 -
Mupr17969g00001 409 PRINTS DnaJ domain signature 23 41 IPR001623 -
Mupr17969g00001 409 PRINTS DnaJ domain signature 78 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17969g00001 Mupr-Chr17969 2535 6918 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17969g00001 19 84 C2H2 Transcription Factor Family AT1G74250 42.254 6.04e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17969g00001 - - gmx:100800929 770