Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr17967g00001 ATGGCAGGGTTGTTCTCTCTAGGTGGAAGTGGAAGGGGAGGCCCACAAAACAAGGAAGAGGAAGAGGTAGAAAAAGGAGAACACAACCTATTCTTGTTCAGGAACGAGGAGATCTACAACAACAACAACAACAAGGGGTTCGAGATATGGCCACAGTCGTATCAGCATCACCAAAACTTGAGCAACTACTTTGCGTTTGGAGTGGGTCCTAGTCGCAGGAATTGTTCAAGCGCTAACGAGGAGGACGTATCCTTCTGCGTGTCTGATGAGTCAACGAGATTTGGATTAACTGTCATGAGGTCTGGAGGCACAGCAAGCAGCGGCGTCAACTGTCAGGACTGTGGCAACCAAGCCAAGAAAGACTGCGCCCATCTCAGATGCAGAACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCATACCCACGTCAAGAGCACTTGGGTCCCCGCAGCCAAACGCCGCGAACGCCAACAACAACTCACTGCGTTGCACAACCAACAACAATTTCGCGGAGACAATATTCCTAAACGCCATAGAGACTCTCAACTTGCCTGCGCTCCTCCACCCATCACTTCCACAGGGTTAGAGGTGGGACAATTGCCAGCTGAGGTGAACACTTCGGCGGTGTTTCGATGTGTGAGAGTGAGCGCAGTGGACGCTTCAGATGAACAGTGCGCGTACCAAACCTCTGTCAACATCGGAGGGCATGTTTTCAAGGGAATTCTCTACGATCAAGGTCCCGAAAGTTCTTACACTAGTACTGCAGCAGCTGAGGGTTCCTCCGGTGGTGGTGAACCTCAACAACACGGTCTAATAACCACCGCAACAACCAGCGGGAACAACCCTTTTGACCCTTCGCTTTACCCCGCTCCGCTTAATGCTTTCATGGCTGGTACGCAATTCTTCCAACCCCCAAGATCTTAA 921 0.5125 MAGLFSLGGSGRGGPQNKEEEEVEKGEHNLFLFRNEEIYNNNNNKGFEIWPQSYQHHQNLSNYFAFGVGPSRRNCSSANEEDVSFCVSDESTRFGLTVMRSGGTASSGVNCQDCGNQAKKDCAHLRCRTCCKSRGFQCHTHVKSTWVPAAKRRERQQQLTALHNQQQFRGDNIPKRHRDSQLACAPPPITSTGLEVGQLPAEVNTSAVFRCVRVSAVDASDEQCAYQTSVNIGGHVFKGILYDQGPESSYTSTAAAEGSSGGGEPQQHGLITTATTSGNNPFDPSLYPAPLNAFMAGTQFFQPPRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr17967g00001 306 MobiDBLite consensus disorder prediction 1 26 - -
Mupr17967g00001 306 NCBIfam LRP1 C-terminal domain 199 246 IPR006511 -
Mupr17967g00001 306 MobiDBLite consensus disorder prediction 248 280 - -
Mupr17967g00001 306 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 292 IPR007818 GO:0003700|GO:0006355
Mupr17967g00001 306 NCBIfam putative zinc finger domain, LRP1 type 110 152 IPR006510 -
Mupr17967g00001 306 Pfam Domain of unknown function (DUF702) 108 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr17967g00001 Mupr-Chr17967 3270 4678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr17967g00001 1 306 C2H2 Transcription Factor Family AT1G75520 45.125 3.51e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mupr17967g00001 DUF702 1.8e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr17967g00001 - - gmx:100818588 409.838